| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0004 |
|---|
| Symbol | |
|---|
| ID | 6366564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 4099 |
|---|
| End bp | 6507 |
|---|
| Gene Length | 2409 bp |
|---|
| Protein Length | 802 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642675406 |
|---|
| Product | DNA gyrase, B subunit |
|---|
| Protein accession | YP_001950263 |
|---|
| Protein GI | 189423086 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
|---|
| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGT TCGAACAAAA CGGAACAGCA GCATCAAATG AATACGGCGC TGGCAGCATC
AAGGTCCTTG AAGGGCTTTC AGCAGTCCGT AAACGCCCGG CCATGTATAT CGGCTCTACT
GCCAGTGCTG GTCTGCACCA TCTGGTGTAT GAAATCGTTG ATAACTCGAT CGACGAGGCA
CTGGCCGGTC ACTGCAACGA TGTCTCGGTA ACCATCAACA CGGATGGCTC AATCACCGTG
GTGGACAACG GGCGGGGTAT CCCTACCGAC ATGCACCCCA CCGAAGGACG TTCGGCAGCC
GAGGTCGTTC TTACCGTGCT GCATGCCGGC GGCAAGTTTG ACAACGACTC CTACAAGGTC
TCAGGCGGTC TGCACGGTGT TGGTGTCTCG GTTGTCAACG CGCTTTCCAA GTGGCTTGAC
CTTGAGATCA GGCGCGATGG CAAGATCTGG CGCCAGACCT ATCACCGTGG TGAACCGCAA
TCGCCGCTGG AGGTAACCGG TACGACCCGT CGCCGCGGCA CCAAGATCAC CTTTATGCCG
GATGAGGAGA TTTTTGAAAC CACGGAATAC TCCTTTGATG TGCTCTCCCA GCGTTTGCGG
GAACTGGCGT TCCTGAATGC CGGGGTGCGG ATCAAGATCA ATGATGAGCG GGCTGACGGA
AAATCCCACG ACTTTTTCTA CGAAGGCGGG ATCAACTCCT TTGTGGAATA CCTGAACCGG
GCCAAGACGC CGCTGCACCA GAAACCGATC TACTTCAAAG GGGAAAAAGG CGGTGTGGAG
ATGGAAGTCT CCATGCAGTA CAACGATACC TATGATGAAA AGATCTTCAG CTTTGCCAAT
AACATCAACA CCCATGAAGG CGGCACCCAC CTGGCAGGTT TCAAGGCGGC CCTGACCCGC
ACCATGAACA CCTATGCAGC CGGTAACAAC CTGACCAAAA ACGCCAAGGT GGCCATCTCA
GGCGATGACC TGCGGGAAGG GATGACCTGT GTCATCTCGG TCAAGATCCC CCAGCCGCAG
TTTGAAGGTC AGACCAAGAC CAAGCTGGGT AACTCGGAAG TTAAAGGCTA TGTTGAATCG
CTCCTCAATG AAAAACTGGC GGTCTATCTG GAGGAAAATC CCCAGGTGGC CAAGCGGATT
CTGGAAAAAT CCATTGAAGC AGCCCGCGCC CGTGAGGCTG CCCGCAAGGC CCGTGACCTG
ACCCGCCGTA AAGGGGCCCT TGATCTGGGC GGCCTGCCCG GCAAGCTGGC TGACTGCCAG
GAAAAGGACC CGGCCCTGTG TGAACTGTAT CTGGTCGAGG GTGATTCAGC AGGCGGTTCC
GCCAAACAGG GGCGTGACCG TCGCTTTCAG GCGATCCTGC CGCTGAAGGG CAAGATTCTC
AACGTTGAAA AGGCCCGCTT TGACAAAATG CTCTCCTCCC AGGAGATCCG CACCCTGATC
ACTGCCATGG GTACCGGTAT CGGCAAGGAT GACTTTGACA TTGCCAAGTT GCGCTACGGC
CGGATCATTG TCATGACTGA CGCCGACGTG GACGGCTCCC ACATCCTGAC CCTGCTGTTG
ACCTTTTTCT ACCGCAACAT GCAGGAGCTG ATCGAGCGCG GCCACCTCTA CATTGCCCAG
CCGCCGCTCT ATAAGGTCAA GCGGGGTAAA AAGGAACTGT ATCTGCGTAA CGAGGCAGCC
CTGCAGACCT TCCTGCTGGA GGAGGGGGCT GAGGAGCTGA TCCTGAGCAT GGAAAAAGGG
GATCGCTCCT ACATCGGCAA GCAGATCATT CCGGTGATCC GCCAACTGAT TGAGTGGCGG
GCTCTGTTTG AAAAGGTGGT TAAAAAAGGT ATTCCGGCTG ACCTGCTTGA TCTGCTGATC
AGGGCCGGGG TACGGCCGGG AATTGAGGAA GTGGCAGGAC TGGAGTCCTA CCTGAACACC
ATGCAGGGAT TGATAGACGA TTGTGATTAC CAGTACCAGG CAGAGGATGA GCGGGTCACC
TTCAGGATCG GCAATATGCG TTCGGTGATT GATAACCAGA CGCTCGGGGT TCTTGCCAGC
CATGAATATG AACTGCTGGT TGAATCAAAC CGTAAGGTGG CAGAGCTGAT GGCAGGCGGA
TTGGCCCGTC TGGAAGAAAA CGGCAAGGGA CTGCTTGAGA CCAGCCGACA TGAAGAACTG
CTGAGCTACT TCCTGGACTA TGCCAAAAAG GGCCTGGCGA TCCAGCGCTA CAAAGGTCTG
GGTGAGATGA ACCCGGATCA GCTCTGGGAG ACCACCATGA ATCCGGAGAA CCGGATCCTG
TTGCAGGTCA AGATTGAGGA CGTGGTTGAG GCTGATCAGA TTTTTACGGT GTTAATGGGC
GATCAGGTTG AACCGCGCAG GGAATTTATT GAATTGAATG CGTTGAATGT CGTCAACCTG
GATGTCTAA
|
|---|
| Protein sequence | MSEFEQNGTA ASNEYGAGSI KVLEGLSAVR KRPAMYIGST ASAGLHHLVY EIVDNSIDEA
LAGHCNDVSV TINTDGSITV VDNGRGIPTD MHPTEGRSAA EVVLTVLHAG GKFDNDSYKV
SGGLHGVGVS VVNALSKWLD LEIRRDGKIW RQTYHRGEPQ SPLEVTGTTR RRGTKITFMP
DEEIFETTEY SFDVLSQRLR ELAFLNAGVR IKINDERADG KSHDFFYEGG INSFVEYLNR
AKTPLHQKPI YFKGEKGGVE MEVSMQYNDT YDEKIFSFAN NINTHEGGTH LAGFKAALTR
TMNTYAAGNN LTKNAKVAIS GDDLREGMTC VISVKIPQPQ FEGQTKTKLG NSEVKGYVES
LLNEKLAVYL EENPQVAKRI LEKSIEAARA REAARKARDL TRRKGALDLG GLPGKLADCQ
EKDPALCELY LVEGDSAGGS AKQGRDRRFQ AILPLKGKIL NVEKARFDKM LSSQEIRTLI
TAMGTGIGKD DFDIAKLRYG RIIVMTDADV DGSHILTLLL TFFYRNMQEL IERGHLYIAQ
PPLYKVKRGK KELYLRNEAA LQTFLLEEGA EELILSMEKG DRSYIGKQII PVIRQLIEWR
ALFEKVVKKG IPADLLDLLI RAGVRPGIEE VAGLESYLNT MQGLIDDCDY QYQAEDERVT
FRIGNMRSVI DNQTLGVLAS HEYELLVESN RKVAELMAGG LARLEENGKG LLETSRHEEL
LSYFLDYAKK GLAIQRYKGL GEMNPDQLWE TTMNPENRIL LQVKIEDVVE ADQIFTVLMG
DQVEPRREFI ELNALNVVNL DV
|
|---|
| |