Gene Glov_0003 details

Gene Information

• Locus tag: Glov_0003
• Symbol: recF
• ID: 6368029
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter lovleyi SZ
• Kingdom: Bacteria
• Replicon accession: NC_010814
• Strand: +
• Start bp: 2996
• End bp: 4102
• Gene Length: 1107 bp
• Protein Length: 368 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 642675405
• Product: recombination protein F
• Protein accession: YP_001950262
• Protein GI: 189423085
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1195] Recombinational DNA repair ATPase (RecF pathway)
• TIGRFAM ID: [TIGR00611] recF protein

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00792918
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTTTTTGA AGCAAGTATG GCTTGAACAA TACCGTAATA TTCAAAAAGC CTGTATTCAG 
CCGGCACGGC ACCTGACAGT CCTGTATGGC AGAAACGGGC AGGGTAAAAC CAATTTTCTG 
GAGTCTTTGT ACCTGCTTGG GAATGCGCGA CCTTTTCGAG CTGCCAAGGT TCCTGATCTG 
ATCAGCCATG GCAGCCGGTC AGCAGCAGTG CGTGGGCTGG TACTGGCAGC AGGCGTTGAA 
AGTACGATTG TACTCCATGT TGAAAACAGC ACCCGCCGGG TAACGATTGA TGATAAGGCG 
GTGCATCGGG CAGCTGATCT GCATGGAAAG CTGGCAGTTG TTGTCTTTTC ACCCGATGAT 
ACAGCCATGG TCAAGTTGGG ACCGGAAACC AGACGGCGAT ATCTTGATCG TTCACTGTAT 
GCCAGTGATG CTGCTTTTCT GTCGGATTAT CATACTTACT ACCGCATCCT CAAGCAACGT 
AATGCGCTGC TTAAGACCAA TCAGCAGGCA GGGCTAGATC TCTGGACTGA ACAACTGGCA 
ACAGCCGGCA TCAGGTTAAT GCAGCATCGT CAACACTACA CCAGCCGGCT CAATCAGCTG 
CTGCAACAGA AGTATCAGCA GATAGCAGGA GAACAGGAAA AAGTATCTGT TGTGTACCAG 
CCTGATGTGA TCTGTACTGC AGAGGAAAAT GGCACAGAAC TACTGTTAAA TGTATTTAGA 
AATCAGCATG AACAGGATCT GCGGTACAAG AGTACCGGCC GGGGTCCCCA TCGTGATGAT 
CTGTTGTTTT CAATTGGTGA TCGCCCCCTG AAAAGTTTTG GTTCTCAGGG ACAACAGCGC 
AGCTTTGTGC TGGCTCTGAA AATGGCAGAG CTTGACCATC TTCAGGAAAC ATTTGGCGAA 
ATGCCCTTGT TACTACTTGA TGATATTGCT TCTGAACTGG ACCGGGAGCG GATGACGAAC 
CTGCTGAGCT ATGTACGGCA GCGGGAGGTC CAGGTACTGA TAACAACAAC CGACGTAACT 
CCCTTTCTTC CGGTGTTGCA GCAGGACAGC AAGCTATTCC GGGTTGAAGA AGGCAGACTG 
ACGTACGAAG GAAACGGAAC ACCATGA 

 

Protein sequence

MFLKQVWLEQ YRNIQKACIQ PARHLTVLYG RNGQGKTNFL ESLYLLGNAR PFRAAKVPDL 
ISHGSRSAAV RGLVLAAGVE STIVLHVENS TRRVTIDDKA VHRAADLHGK LAVVVFSPDD 
TAMVKLGPET RRRYLDRSLY ASDAAFLSDY HTYYRILKQR NALLKTNQQA GLDLWTEQLA 
TAGIRLMQHR QHYTSRLNQL LQQKYQQIAG EQEKVSVVYQ PDVICTAEEN GTELLLNVFR 
NQHEQDLRYK STGRGPHRDD LLFSIGDRPL KSFGSQGQQR SFVLALKMAE LDHLQETFGE 
MPLLLLDDIA SELDRERMTN LLSYVRQREV QVLITTTDVT PFLPVLQQDS KLFRVEEGRL 
TYEGNGTP