Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_0002 |
Symbol | |
ID | 6368012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 1870 |
End bp | 2988 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642675404 |
Product | DNA polymerase III, beta subunit |
Protein accession | YP_001950261 |
Protein GI | 189423084 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000138199 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTCA AAATCGACAG AGATACCTTT CTTAAAGCGC TGCAAAAAGT ACAGGGCATT GTCGAAAAAC GGACATCGAT GCCAATCTTA TCGAATATCC TGATTGAGGC GCAGGGGGAT AATCTTGAAA TCATCGCTAC TGATCTTGAA GTAGGCCTGA AAGGCAACTA TCCTGCCAAA GTGGAAAAAG ACGGCCGGAT TACAGTTGGT GCAAAGAAAC TATATGAAAT AGTGAAAGAA TTACCAAACC AGGAAATTAC GTTTTCAACC AAGGAGAACG ACTGGGTAGA AATCACCTGT GGCAAAGTCA GATTTAATAT TGTTGGATTA CCTTCAGATG AGTTTCCGGC GGTAGCTACG GTTAAAGATG AACAACTGCT GGAGCTTGAA GCAGCGTTGT TAAGAAAGAT GATTGAAAAA ACATCCTACG CAATCTGTAA CGATGAAACC AAATACAATC TCAACGGCAT TTTCACCAGG GTCGAACAGT CTGAAAAAGG TCAGTGTTTG AAGATGGTTG CTACTGATGG ACACCGTTTG TCTATTGCCT CTGGTCCTTT CAGTGGTACG GCAAATCCAG AACTGTTGAA GGGAGTTATA CTTCCCAAAA AAGGTATTTT CGAGATTAAG AAGATTACCG ACGAAGGTGA CGGGCTTCTG CAATTCGGTT TTGTTGACAG TAGTGCTGTG ATCAAAAAAG GAGATACAAC ACTGATCATG CGGCTGGTTG ACGGTGAATT CCCTGATTAT ACCAGGGTCA TACCGGCAGC GAACGAACAG ATTGTAAAGG CACCAAGAGA AGAACTGATC CATGCCGTGC GACGGATGGC TATTTTGTCC AGCGAGAAAT TCAAGGGAAT TATGTTGGAG ATTGAAGGAA ATGCCGTCAA GATTTCATCA AGCAATCCGG AGCTTGGAGA TGCCATGGAA GAGCTTGATG TGAGCTATGA TGGAAACCCG TTTTCTGTTC GATTTAATGC CCGTTACCTG CTGGATGTCC TGATGGTTTG CGAGAGCCAA CACGTATTGA TGAAATTTAA AAACGAACTG TCACCATCGA TTGTAACCCC TGATTCGGAT GATGAACTTT TAGCGGTTAT CATGCCAATG AGGCTCTAG
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Protein sequence | MNFKIDRDTF LKALQKVQGI VEKRTSMPIL SNILIEAQGD NLEIIATDLE VGLKGNYPAK VEKDGRITVG AKKLYEIVKE LPNQEITFST KENDWVEITC GKVRFNIVGL PSDEFPAVAT VKDEQLLELE AALLRKMIEK TSYAICNDET KYNLNGIFTR VEQSEKGQCL KMVATDGHRL SIASGPFSGT ANPELLKGVI LPKKGIFEIK KITDEGDGLL QFGFVDSSAV IKKGDTTLIM RLVDGEFPDY TRVIPAANEQ IVKAPREELI HAVRRMAILS SEKFKGIMLE IEGNAVKISS SNPELGDAME ELDVSYDGNP FSVRFNARYL LDVLMVCESQ HVLMKFKNEL SPSIVTPDSD DELLAVIMPM RL
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