| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_2519 |
|---|
| Symbol | |
|---|
| ID | 6355138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 2758649 |
|---|
| End bp | 2759563 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642670107 |
|---|
| Product | ROK family protein |
|---|
| Protein accession | YP_001944516 |
|---|
| Protein GI | 189347987 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.892338 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCA GATACTGGGG GATCGATCTC GGAGGCAGCA AGATAGAGGC TGTTGTTGTC
GATGAGGCGA TGAAGCCGCT TATCCGGAGG AGAATAGCGA CAGAGGCGAA TGAGGGTTAT
CGGCACATAA CCGGAAGAAT TGTCAACCTG CTTGATCTGG TTTCCAGGGA GAGCGGATTT
CCTCTTCCGA AGGTTATCGG AATGGGTACT CCGGGAAGGT ATGACGCTGA AGCCGGCGCT
TTGAAAAACT CCAATACTCT CTGTCTGAAC AGCCGGAATC TTAAAGTTGA TCTTGAGGGC
CTGCTCCAGT GCACCGTGTT GATAGAAAAC GATGCCAACT GTTTTGCCCT TGCGGAATCG
CTGCTTGGTT CCGGCAGAAA TCTTATGAAA GGGCGTGACC GGACGGCATT CGGCATGATT
ATCGGTACCG GAGTGGGAGG AGGCATCGTG TGCGGAGATC GGGTATTGCA TGGCGCACAC
GGTATTGCGG GCGAGTGGGG ACACAATGAA CTTGTTCATG ATGGCGAGCC TTGTTATTGC
GGCAAACGGG GCTGTGTAGA GACAGTTATT TCCGGCCCTG CCCTCGAGCG CTATTATTGT
TCGCTTACCG GCATCTCAAG ATCGCTGCCG GAGATTGCAG GCTTATGTGA CGTTGACCGG
TCGGCGGAAG CAACTATCAG ACGTCTTGTG GATAATTTCG CCAGAGCTCT TGCATCGGTT
CTGAATATAC TTGATCCGGA CTGCTGTATT ATCGGCGGAG GTGTCGGATG TATCGGACGC
TTGTATTCAC AGGAGTGCAT TGGCCGGATT GAACGGAGTC TATTCAATGC AACATTACAG
ATTCCCTTAT TAAAGCCGCA GCTGGGCGAC AGTGCGGGTG TATTCGGAGC GGCATTGCTG
GCCGTGAACT CTTAA
|
|---|
| Protein sequence | MSSRYWGIDL GGSKIEAVVV DEAMKPLIRR RIATEANEGY RHITGRIVNL LDLVSRESGF
PLPKVIGMGT PGRYDAEAGA LKNSNTLCLN SRNLKVDLEG LLQCTVLIEN DANCFALAES
LLGSGRNLMK GRDRTAFGMI IGTGVGGGIV CGDRVLHGAH GIAGEWGHNE LVHDGEPCYC
GKRGCVETVI SGPALERYYC SLTGISRSLP EIAGLCDVDR SAEATIRRLV DNFARALASV
LNILDPDCCI IGGGVGCIGR LYSQECIGRI ERSLFNATLQ IPLLKPQLGD SAGVFGAALL
AVNS
|
|---|
| |