Gene Clim_2508 details

Gene Information

• Locus tag: Clim_2508
• ID: 6355127
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: -
• Start bp: 2748399
• End bp: 2750420
• Gene Length: 2022 bp
• Protein Length: 673 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 642670096
• Product: Peptidoglycan glycosyltransferase
• Protein accession: YP_001944505
• Protein GI: 189347976
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0768] Cell division protein FtsI/penicillin-binding protein 2

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGACC GAGATTTTCC GGAAAGACCG GGAGATGCCG AGTTTGCCAA GAGGCTCGGT 
ATCGTGGTTC TGCTTTTTAT TGCTTTTCTC GGAGCGATTA TTGCGATGCT GCTGAACATT 
CAGGTCATCA ATGTTCGTAA ATATCAGGAA AAGGCAGAAA AGCAGTATGT GAGGGTCGTT 
ACGGAAAAGG CGCAGCGGGG AGTTATTCTC GACCGGCAGG GCAGGATGCT TGCAGAAACG 
GTTGAAACCA TCTCATTTTA TGCCGATCCC GAAAAAGTCA GGCACACGCC GCTGGTCGAT 
GAAAACGGGA CGGCAGTACT CGATAAAAAA ACCAGAAAAC AAAAGACATT CGATAACTCC 
CGGGAAGTTG CCGCTCTGTT TTCAGAAAAA CTCGGCAAGA GCCGCAGGGA GTATCTGAAA 
AAGCTCAGGC GTGGAAAACG GGTTGTTGTG CTGGGGAGGA AGATTCCTGC GGCACAGGCT 
CTGCCGCTCA TGCAGCAACC CATTCACGGG GTTTGGTCCG ACAGGGAGCA GCAGCGTTAT 
TATCTGAATG TCGCCGCTCA GGTAATCGGA GTCACGGACA GTAAAAATAG CGGCATCAGC 
GGTCTTGAAC TGCAGTTTGA CAGGGAGCTG AAAGGGCGTG ACGGTTCGAG AATTTTTCAG 
CGTCTGGCAA CAGGTAAAAA GTATCCGGCT CCGGACGCCC TCCAGCAGGA ACCGCGAAAA 
GGCCATACGG TTCAGCTTAC CCTGGATGCA GATATCCAGA GTATCGTTGA GGATGAGCTT 
GCGGCGGCAG TCGGCACATT CCAGGCAAAC GCCGCTACGG GGATCGTGCT CGATGTCCGA 
ACTGGAGAGG TTCTCGCCAT GGCTAATAAT CCGACATTCG ATCTTAACCG CAGGGTTACA 
TGGACTCCGG AGAAGGCCCG AAACCGTTCG GTAACGGACA GTTTCGAGCC GGGTTCCACC 
TTTAAGCTGG TCATGGCGGC CACCGCGACA GAAGTCCTCA AGAGGCGTGC CGAAGACAAT 
GTTTTTGCCC ATAACGGCGT ACTGCCCCTC TATGGGCTGA GAATAAGGGA TCACGAACCT 
TATGGCACGA TTACGTTCCG TGAGGCGATC ATGCATTCAA GCAACGTTGT TGCTGCTAAA 
ACCGCCATGG AAACGGGAAA GAAGACATTT TACTCCTACA CCAAAAAGTT CGGGTTTGGC 
TCAAAGACCG GGGTCGGGTT GATAGGTGAG TCCCAGGGAA GGGTAAGGGC TCTGAAAAAC 
TGGGATCGGA CAACGCTTCC GTGGATGGGT TATGGATATC AGGTGATGGT GACGCCGCTG 
CAGATTCTGC AGGCTTATGC CGCGGTTGCC AATGACGGCG TTCTGATGAG GCCTTATATT 
GTCAGGCGGA TTACTGATGA TCAAGACCGT ACTGTGCGCG AGAATCAGCC GCAGAAGGTA 
AGGGAAGTGG TTTCTCCGGC AACGGCAAGA TACATGGGCA GAGAGTATTT CAAGGCGGTC 
GTTGACAGCG GAACTGCCAG AACGGCGGCA ATTCCGGGTA TGAGCGTCGC CGGCAAAACC 
GGTACGGCAC GACGTGCTGC GGGGGGGTCT TATGCCAATG CAGTCTATGT GTCATCTTTT 
GTGGGCTATT TCCCGGTGGA ATCTCCCCGT TATGCAATGA TTGTACTTGT TGAGGAGCCC 
CGGACGGCAT ACTATGCCGC AACGGTGGCC GCTCCGGTTT TTTCAAAAAT TTCTTCGAGA 
ATCCTGGCAT GCTCCGAGGA ACTGCAGAAA AATCTTTCAT TCAGGTCCCC TGAACAGAGT 
CTGCTCGATT CAACAAAAAC AGTGGCAGTG CCGGAACTGA AAGGAATGAA GGGGCGCGAT 
GCGCAGAGAG TACTCAAATG GCTTGGTCTT GAGATGGAGC TCAGCGGCGG CGTCGATGGC 
GTTGTGACTT CCCAGAACGT TCCTCCGGGG ACGAAAGTTG AAAAAACAAG GGTTATCAGA 
GTAGGACTCT CTTCGAAAAC TCCAAAAAGG GCCTTTCTAT GA 

 

Protein sequence

MSDRDFPERP GDAEFAKRLG IVVLLFIAFL GAIIAMLLNI QVINVRKYQE KAEKQYVRVV 
TEKAQRGVIL DRQGRMLAET VETISFYADP EKVRHTPLVD ENGTAVLDKK TRKQKTFDNS 
REVAALFSEK LGKSRREYLK KLRRGKRVVV LGRKIPAAQA LPLMQQPIHG VWSDREQQRY 
YLNVAAQVIG VTDSKNSGIS GLELQFDREL KGRDGSRIFQ RLATGKKYPA PDALQQEPRK 
GHTVQLTLDA DIQSIVEDEL AAAVGTFQAN AATGIVLDVR TGEVLAMANN PTFDLNRRVT 
WTPEKARNRS VTDSFEPGST FKLVMAATAT EVLKRRAEDN VFAHNGVLPL YGLRIRDHEP 
YGTITFREAI MHSSNVVAAK TAMETGKKTF YSYTKKFGFG SKTGVGLIGE SQGRVRALKN 
WDRTTLPWMG YGYQVMVTPL QILQAYAAVA NDGVLMRPYI VRRITDDQDR TVRENQPQKV 
REVVSPATAR YMGREYFKAV VDSGTARTAA IPGMSVAGKT GTARRAAGGS YANAVYVSSF 
VGYFPVESPR YAMIVLVEEP RTAYYAATVA APVFSKISSR ILACSEELQK NLSFRSPEQS 
LLDSTKTVAV PELKGMKGRD AQRVLKWLGL EMELSGGVDG VVTSQNVPPG TKVEKTRVIR 
VGLSSKTPKR AFL