| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_2506 |
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| Symbol | |
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| ID | 6355125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 2745422 |
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| End bp | 2746843 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642670094 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase |
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| Protein accession | YP_001944503 |
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| Protein GI | 189347974 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000108281 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCGG TACTTGATAT GCTTGACCTT CAGGGGATCG GCAGGATTGT TGTCGGCGAT
GCAGCCGACG GCCTGAGCAG GATTGTCGAG CCGGTTGTGG TTATTGATTC CCGTGAGGTT
CAGGAGGGAG GGATATTTGT TGCACTTGAG GGGGAGCGAA CAGATGGACA TCGGTATATC
GATGATGTTT TTGCCAAAGG CGCTTCTCTT GCGGTCGTTT CGGAGGCGTG GTATGCATCG
CATGGGCAGA AAGACGGAGC CGCCGGACGG CGAAGCTATC TGATCGTGGA CGATACGGTC
AGGGGGCTTC AGCAGATGGC GGTGGCCTAT CGTCGGAGCT TCTCCATTCC GGTCTTCGCC
GTGGGGGGGA GTAATGGCAA AACCACCACC AAGGAGCTTA TCGCTTCGGT ATTAGGTGTC
GGATTCAAAG TTCATATGAG CAGAGGAAAC CGGAACAACC ACCTCGGAGT CCCTCTGACG
CTGCTGCAGA TGAAGCGGGA TACGGAAATT GCGGTTGTTG AAATGGGTAT AAACCATCCG
GGAGAAATGG AGTTGCTGGC TTCGATTGCC ATGCCGACAC ATGGGCTTCT GACCAATATC
GGCCATGAGC ATCTGGAGTT TCTGCATGAT CTGCAAGGCG TTGCGGCTGC CGAGACCAGG
CTCTATGAGT ATCTCGATGG CCACGGAGGA GTCTGTTTCG TCAATGCCGA CGATCCATGG
CTGCTGAGCG CGGCGTCAAA ACTTGAACGG GCTGTATTGT ACGGATTGAA CGGATGTGGA
GAAGGCGTTC CGCATGCGGA ATCGGCAGCA CTTGACCCTT TCGGACGGCC GTCGTTCATG
CTCTGTTTGT CTCAGGCCTG CGAGTCGGTT ACCCTGAGCC TGACGGGGCG GCATAATGTA
GTCAACGCTC TGGCGGCGGC GGCGGCCGGG TCGTACCTTG GGCTTTCCCT TCGAGAGATA
AAAGAGGGCC TTGAAAACAT GATACCGGCA ACCGGATGGA AACGGCTTGA ATTTCAGGAA
GCCGGCGGGG TCATGATTGT CAACGATACC TATAATGCCA ATCCTGATTC GATGCGTCTT
GCCATCGATC TGCTTTGCGA TCTGCAATGC AGCGGGAGGA AGATTGCCGT ACTTGGCGAT
ATGCTCGAAC TTGGATCATC TGCAGAGCTT GAACATGAAA AGACTGGCAG GTATATTCAG
CAGAGCGGGA TCGATCTGCT TTTCACCTTT GGAGATCTGT CCAAACATTT TTCAACAGGA
AACGCTTCTC GCTCCTGTGG GCATTTTGAA AGCAGGGAAG CGCTTGCGAG TGCTCTCGGT
GACGTTGTCG CCTCCGGCGA TGCTGTGCTT TTCAAGGGTT CTCGCGGAAT GAAGCTTGAA
GAAGTTGCCG ACGCTCTGAA TCACGAACGT TCAACACTGT AG
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| Protein sequence | MKAVLDMLDL QGIGRIVVGD AADGLSRIVE PVVVIDSREV QEGGIFVALE GERTDGHRYI
DDVFAKGASL AVVSEAWYAS HGQKDGAAGR RSYLIVDDTV RGLQQMAVAY RRSFSIPVFA
VGGSNGKTTT KELIASVLGV GFKVHMSRGN RNNHLGVPLT LLQMKRDTEI AVVEMGINHP
GEMELLASIA MPTHGLLTNI GHEHLEFLHD LQGVAAAETR LYEYLDGHGG VCFVNADDPW
LLSAASKLER AVLYGLNGCG EGVPHAESAA LDPFGRPSFM LCLSQACESV TLSLTGRHNV
VNALAAAAAG SYLGLSLREI KEGLENMIPA TGWKRLEFQE AGGVMIVNDT YNANPDSMRL
AIDLLCDLQC SGRKIAVLGD MLELGSSAEL EHEKTGRYIQ QSGIDLLFTF GDLSKHFSTG
NASRSCGHFE SREALASALG DVVASGDAVL FKGSRGMKLE EVADALNHER STL
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