Gene Clim_2479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_2479 
Symbol 
ID6354749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand- 
Start bp2719701 
End bp2720369 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content61% 
IMG OID642670067 
Productputative translaldolase 
Protein accessionYP_001944477 
Protein GI189347948 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00875] fructose-6-phosphate aldolase, TalC/MipB family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.426562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTCT TCATCGATAC CGCCAACCTT GACGAAATCC GTTCAGCCGC CGAACTCGGC 
GTGCTGGACG GCGTCACCAC CAATCCCTCG CTCATCGCGA AAATCGTCGG CGACCCGTCG 
AACTTCACCT ACGGCGACTT CAAGGAGCAC ATCCGGCGCA TCTGCGAGAT TGTCGACGGT 
CCGGTCAGCG CCGAGGTCAC CTGCCTCAAG GCCGAGGAGA TGATCGCCCA GGGCGAGGAT 
CTCGCGGCGA TCCACGAGAA CGTGGTGGTC AAATGCCCGC TCACCATCGA CGGCCTGAAG 
GCCATCAAAC ACTTTTCCGC GAGCGGCATC CGCACCAACG CCACGCTGGT ATTCTCGCCG 
AATCAGGCGC TGCTGGCAGC CAAGGCCGGA GCCGATTACG TGAGCCCCTT CGTCGGCCGC 
CTCGACGACA TCAGCACCGA CGGCATGGAA CTTGTCGAGC AGATCGTTAC CATCTACGAC 
AACTACGGCT ACCCGACAGA GGTGATCGTG GCCAGCGTCC GCCATCCTCA GCATGTGGTC 
ACCGCCGCCA TGATGGGCGC CGATATCGCC ACCATTCCCT ACAGCGTCAT CAAACAGCTC 
GCAAACCACC CGCTCACCGA CGCGGGCCTC ACGAAGTTCA TGGATGATGC GGCCGTGATG 
AAGAAATAG
 
Protein sequence
MKFFIDTANL DEIRSAAELG VLDGVTTNPS LIAKIVGDPS NFTYGDFKEH IRRICEIVDG 
PVSAEVTCLK AEEMIAQGED LAAIHENVVV KCPLTIDGLK AIKHFSASGI RTNATLVFSP 
NQALLAAKAG ADYVSPFVGR LDDISTDGME LVEQIVTIYD NYGYPTEVIV ASVRHPQHVV 
TAAMMGADIA TIPYSVIKQL ANHPLTDAGL TKFMDDAAVM KK