| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_2477 |
|---|
| Symbol | |
|---|
| ID | 6354747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 2717858 |
|---|
| End bp | 2719012 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642670065 |
|---|
| Product | protein of unknown function DUF955 |
|---|
| Protein accession | YP_001944475 |
|---|
| Protein GI | 189347946 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2856] Predicted Zn peptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.204932 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTTG CTGTTAATGC ACATGTCCTT GAATGGGCGT TAGACCGTTC TCGGCGAAGA
GAAAGTCTGG AACGGAAATT TCCGAAGCTA TCCGGCTGGC GGGATGGCGA TGCATTGCCG
ACTATCCGGC AATTGCAGGA TTTTTCGAAA GCGGCTGCTG TACCTTTTGG CTATCTCCTT
TTGCAGAATC CTCCTGTCGA GCAATTGCCT GTCGCCAATT TCCGAACAGT GTCGGCTGAA
TCCGGATCCG GGTTAAGTCC CGAACTGATT GATACCATTC AGGCAATGCA ACGCAGGCAG
GTCTGGATGA GAGAGTATCT CATCGCTGAA GGGCATGACC GCCTGCCATT TGTTGGTTCT
CGCGGGATTG ACACTGATCC TGCTGCGGTT GCCAGAAATA TCAGGGGTGT TCTTGATATT
GGCGAGAACT GGGCAGCAAC TCAGCCAAAC TGGGGTGAGG CTTTGAGAGC CTTGGTTGCA
AAGGTAGAAA ATGCAGGTAT CCTGGTCATG TCCAACGGGA TTGTCGAGAA CAACACGCAT
CGGAAACTCG ATCCGCAGGA ATTCCGCGGT TTTGTGCTTG TTGACGACTA TGCCCCGCTT
GTGTTCCTCA ATGGTGCAGA TGGAAAAGCT GCCCGAATGT TCACTCTTGC GCATGAGCTT
GCCCACATCT GGCTTGGCGT CAGCGCCGCC TTCGATTTAC GGGATTTGCA GCCGGCAGAC
AATGATAACG AACGGGCCTG CAACCTCATA GCGGCAGAAT TTCTTGTCCC TTCGGTCGTT
CTTGCAGAAG TCTGGCCGCA GGTTCGTGGG AGAGATAACC TTTTTCAGTT ACTTGCTAAA
CGCTTCAAGG TCAGTGAAAT CGTAGCGGCA CGGCGGCTGC TTGATATGGG GTTTATTGCT
CGAACAGAAT TCTTCAGATT CTACAACGAA TGGCAGCAAA ATGAACTCAG GATTGCTCAT
AAAAAAGCTG AAGATGACTC TGGGGGTAAT TATTATGCCA ATCTAAACCT TCGTATAGGT
AACAGGTTCG GCAATTTGCT GACCCGATCG GTCCAGGCTG GAACGACCCT GTATACAGAT
GCATGGCGGT TGACAGGCCT GAAGAAGAAT ACTTTCCAGG AATACGCAAA AAAGATATTC
GGGAGAAGCG TATGA
|
|---|
| Protein sequence | MKVAVNAHVL EWALDRSRRR ESLERKFPKL SGWRDGDALP TIRQLQDFSK AAAVPFGYLL
LQNPPVEQLP VANFRTVSAE SGSGLSPELI DTIQAMQRRQ VWMREYLIAE GHDRLPFVGS
RGIDTDPAAV ARNIRGVLDI GENWAATQPN WGEALRALVA KVENAGILVM SNGIVENNTH
RKLDPQEFRG FVLVDDYAPL VFLNGADGKA ARMFTLAHEL AHIWLGVSAA FDLRDLQPAD
NDNERACNLI AAEFLVPSVV LAEVWPQVRG RDNLFQLLAK RFKVSEIVAA RRLLDMGFIA
RTEFFRFYNE WQQNELRIAH KKAEDDSGGN YYANLNLRIG NRFGNLLTRS VQAGTTLYTD
AWRLTGLKKN TFQEYAKKIF GRSV
|
|---|
| |