| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_2442 |
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| Symbol | sdhA |
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| ID | 6355913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 2676468 |
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| End bp | 2678408 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642670032 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001944442 |
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| Protein GI | 189347913 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGCC TCAATGCCGG AATTCCGGAA GGACCGATAG CTGACAAATG GACTGCATAC
AGGTCGGCGG CAAAACTGGT CAATCCCAAC AACAAGAGAA AACTCGACAT CATCGTTGTC
GGCACCGGTC TTGCCGGGGC ATCCGCTGCG GCAACGCTTG GCCAGCTCGG CTACAACGTC
AAGGTGTTCT GTTATCAGGA TACGCCTCGC CGGGCGCACA GCATTGCCGC CCAGGGCGGA
ATCAATGCGG CTAAAAACTA TCCCAACGAC GGAGACAGCG TCTATCGGCT TTTTTACGAT
ACCATCAAGG GTGGGGACTA CCGTTCCCGT GAAGCCAATG TCTATCGTCT GGCCGAAGTC
AGCAACCAGA TTATCGATCT TTGTGTGGCT CAGGGTGTTC CGTTCGCCAG GGAGTACGGC
GGTCTTCTGA CCAACCGTTC ATTTGGAGGA GCCCAGGTGT CAAGGACCTT TTATGCCCGG
GGGCAGACCG GGCAGCAGCT TCTGCTCGGA GCGTACAGCG CGTTGAGCCG TCAGATCGAC
GCAGGCAACG TTACGCTCTA CAACCGGAGG GATGTGCTCG ATATGGTGCT TGTTGACGGA
AAGGCTCGGG GCATTATTGC CCGCAATCTC GTTACCGGAG CAATCGAGCG TTTCGCGGCG
CATGCCGTCG TTCTTGCAAC CGGCGGATAT GGCAATGTGT TTTATCTTTC CACCAACGCT
ATGGGGTCGA ATGTGTCTCC GGCATGGAGC GCCTATAAAA AAGGCGCCCT GTTCGGCAAC
CCCTCATTTA CCCAGATACA TCCGACCTGT ATTCCTGTAC ACGGAGAGTT TCAGTCGAAG
CTTACCCTGA TGAGTGAGAG TCTTCGCAAT GACGGCAGAA TCTGGGTTCC TGCATATAAA
AAGGATGTCG ACCGGCTGCG TTCAAAGGAA ATAAAACCTT CGGAGATTCC TGATTCCGAC
CGGGACTACT ATCTGGAGCG GCGCTATCCT GCTTTCGGCA ACCTGGTGCC GAGGGATGTC
GCTTCGAGAG CGGCAAAAGA GCGCTGTGAT GCCGGATACG GCGTCAGTTC CACCGGTTTC
GCCGTCTTTC TGGACTTTGC CGATGCCATC AAACGAAAGG GACAGGGCAC TATCGATGCA
CTTTACGGGA ATCTCTTTCA AATGTATGAG CAGATTGTGG CCGACAGTCC TTATGAAACT
CCTATGATGA TCTATCCGGC GGTTCACTAT ACCATGGGGG GCTTGTGGGT CGATTATGAA
CTGATGACAA CGGTTCCCGG CCTCTATGCT ATCGGCGAAT GCAATTTTTC CGATCATGGG
GCAAATCGCC TCGGAGCGTC AGCGCTTATG CAGGGACTTG CCGATGGCTA TTTCATTCTG
CCTGCTACGA TTTCAAACTA TCTTGCTGCG GAAATTCATA CCCCTCGATT CGATCCCGAC
GGTTCGGAGT TCACGCTTGC AGCAGAGAAG GTCAGAGAGC GGCTTGTACG TCTGAAGAAT
ACCGGAGGAA AACAGTCTGT CGATCATTAT CATCGTCAGC TTGGCAGGCT TATGTGGGAG
AACTGCGGTA TGGCAAGAAG CCAGCCAGGC CTTGAAGAGG CGCTTGAGCG GCTTCCGCTG
CTGCGCGAGG AGTTTCATGC GAACGTATGC ATTCCGGGAT CTCTTGACGA GTACAATCCT
GAACTTGAAA AGGCATGGCG CGTTGCCGAT TTTCTTGAAC TTGGCGAGTT GATGGTTCGT
GACGCCCTGC AGCGCAGGGA GTCATGCGGA GGTCATTTCC GTGAAGAGTA CCAGACACCG
GACGGCGAGG CTTTGCGTAA TGATGAGGAC TTTACCTTTG TTGGAGCATG GGAGTATAAG
GGGAAGAGTT GTGCGGCCGA ACTGCATCGT GAAGATCTCA ATTTTGAGGT TGTCAAACCT
TCACAACGCT CGTATAAATA A
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| Protein sequence | MMRLNAGIPE GPIADKWTAY RSAAKLVNPN NKRKLDIIVV GTGLAGASAA ATLGQLGYNV
KVFCYQDTPR RAHSIAAQGG INAAKNYPND GDSVYRLFYD TIKGGDYRSR EANVYRLAEV
SNQIIDLCVA QGVPFAREYG GLLTNRSFGG AQVSRTFYAR GQTGQQLLLG AYSALSRQID
AGNVTLYNRR DVLDMVLVDG KARGIIARNL VTGAIERFAA HAVVLATGGY GNVFYLSTNA
MGSNVSPAWS AYKKGALFGN PSFTQIHPTC IPVHGEFQSK LTLMSESLRN DGRIWVPAYK
KDVDRLRSKE IKPSEIPDSD RDYYLERRYP AFGNLVPRDV ASRAAKERCD AGYGVSSTGF
AVFLDFADAI KRKGQGTIDA LYGNLFQMYE QIVADSPYET PMMIYPAVHY TMGGLWVDYE
LMTTVPGLYA IGECNFSDHG ANRLGASALM QGLADGYFIL PATISNYLAA EIHTPRFDPD
GSEFTLAAEK VRERLVRLKN TGGKQSVDHY HRQLGRLMWE NCGMARSQPG LEEALERLPL
LREEFHANVC IPGSLDEYNP ELEKAWRVAD FLELGELMVR DALQRRESCG GHFREEYQTP
DGEALRNDED FTFVGAWEYK GKSCAAELHR EDLNFEVVKP SQRSYK
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