Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_2439 |
Symbol | |
ID | 6355910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 2673177 |
End bp | 2674508 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642670029 |
Product | protein of unknown function DUF21 |
Protein accession | YP_001944439 |
Protein GI | 189347910 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAATAT TTTTTCTTCT TTTTCTCATC ATTCTCAACG GCCTGTTCGC CATGTCGGAG ATCGCACTGA TAACGGCAAA GCGATCCAGG CTGCAGAGGC TTGCCGCTGA GGGCGATAAA GCAGCTGATG TTGCACTCAA GCTCGGTCAG GAGCCGACAC GATTTCTTTC GACCATACAG ATCGGCATTA CTTCGATCGG TATTCTTAAC GGTATCGTCG GTGAGAATGC CCTTGCCGAA CCGTTTTCAC TCTGGCTGCG CTCTCTTGGA ATGGAGAGTG AGATCAGCAG AATTCTCTCG ACAGCCCTGA TTGTCGTTTC CATAACCTAT GTGACTATCG TCATTGGTGA GCTGGTACCT AAAAGACTCG GCCAGTTCAA TCCCGAAGGT ATTGCAAGGC TTGTTTCCCG ACCCATGCTC GCCCTTGGAA TGCTTACCCG TCCTTTTGTC CGTCTGCTTT CGTTTTCCAC CGATACGATA CTTCGTCTGA TGGGAAAAAA TCCGCATGCT TCGACGAGTG TAACCGAAGA GGAGATTCAC GCCATGCTCG AGGAGGGTTC GGAGGCAGGG ATTATCGAAC AGCAGGAGCA TGAAATGGTG CGCAACGTTT TCAGGCTGGA CGACCGGCAG CTTGGAACCC TTATGGTGCC GAGGGCTGAT ATCGTTTTTC TTGATGTGGC CCTTCCGCTG GAAGAGAATA TCGATCGGGT GACCGGTTCT GAACATTCCC GTTTTCCTGT CTGTCAGGGG GGGCTGCAGT CTCTGCTCGG CGTGGTCAAT GCCAAACAGC TCCTGGCGCA GACGCTTAAA GGGGGGCTTA CGGATTTCGC TGCACAGCTT CAGCCCTGCG TCTATGTGCC TGAAACCCTG ACGGGAATGG AGCTGCTCGA GCATTTCAGG CTCTCGGGAA CCCAGATGGT GTTTGTCGTT GACGAGTACG GAGAAATTCA GGGGCTGGTG ACCATGCAGG ATCTTCTGGA AGCGGTGACC GGCGAGTTTG TTCCCCGTAA TCTCGAAGAT TCATGGGCAG TGCAGCGAGA AGATGGCTCC TGGCTGCTTG ACGGAATGAT TCCCGTTCCC GAACTGAAGG ATTCGCTTGA TCTGAAAAGC GTTCCTGAAG AGGATAAAGG GCTTTACCAT ACGCTGAGCG GACTTCTTAT GTGGCTTCTC GGCAGAATGC CCGTTACCGG GGATGTAACG GAATGGGAGG GATGGAGACT GGAGGTCATC GATCTCGATG GCAAGCGGAT CGACAAGGTT CTGGCATCTC CACTCAATGG AGAGTCTGCG TCAGCGGATT CCGGAAATGC AGCCCGCAGT TCGGAAGGGT AA
|
Protein sequence | MEIFFLLFLI ILNGLFAMSE IALITAKRSR LQRLAAEGDK AADVALKLGQ EPTRFLSTIQ IGITSIGILN GIVGENALAE PFSLWLRSLG MESEISRILS TALIVVSITY VTIVIGELVP KRLGQFNPEG IARLVSRPML ALGMLTRPFV RLLSFSTDTI LRLMGKNPHA STSVTEEEIH AMLEEGSEAG IIEQQEHEMV RNVFRLDDRQ LGTLMVPRAD IVFLDVALPL EENIDRVTGS EHSRFPVCQG GLQSLLGVVN AKQLLAQTLK GGLTDFAAQL QPCVYVPETL TGMELLEHFR LSGTQMVFVV DEYGEIQGLV TMQDLLEAVT GEFVPRNLED SWAVQREDGS WLLDGMIPVP ELKDSLDLKS VPEEDKGLYH TLSGLLMWLL GRMPVTGDVT EWEGWRLEVI DLDGKRIDKV LASPLNGESA SADSGNAARS SEG
|
| |