Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_2420 |
Symbol | |
ID | 6355891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 2650192 |
End bp | 2650815 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642670010 |
Product | NLP/P60 protein |
Protein accession | YP_001944420 |
Protein GI | 189347891 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAG GACGTAGCTT TTCGTCTTTT TTTACCGGCA AATCTGCTGT CTCCGGATCG GTCATACCGG GACTTCTCAT CCTGGGCCTC CTTTCCGGCC TGACGGGATG CAGCAGCATC TCAACAGGGT CGCGGTATGA TCAAGACTGC AAATATAGCT TAAAAAAGAG AAAAACATAT ATTTCGCGCT TCGTCCCGGG AAACCCGGAA CCAGTGGCTG CAGTGCTTCC CGTAAAAGTA TCCGGACAAT CGATGGAGCG GCTTTTTACG GCGGTCCGGG AGCGCCTTGG AACGGCATAC CGCTGGGGCG GAACAGCACT TGACGGTTTT GACTGCTCGG GCTTCGTTCA GTATCTCTAC GAAGACTCCT TTCAGCTGCT CATGCCGAGA ACATCATCCG ATATGGCTAC CCTTGGAGAG GTCGTTCCCC GGAAACAACT CAAACCTGGA GATCTCGTAT TTTTCAGCAA TGGCGGAAAA ACCATCGATC ATGTCGGGGT TTACATGGGG GAGAACAGTT TTGCACATGT ATCGACGAGC AGAGGAGTAA GGGTTGACCG GCTTGATTCG CGCTACTTCG ACAAACGGTA TGCCTGCGCT GCCCGGATCA TAAAAAGGAA GTGA
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Protein sequence | MKTGRSFSSF FTGKSAVSGS VIPGLLILGL LSGLTGCSSI STGSRYDQDC KYSLKKRKTY ISRFVPGNPE PVAAVLPVKV SGQSMERLFT AVRERLGTAY RWGGTALDGF DCSGFVQYLY EDSFQLLMPR TSSDMATLGE VVPRKQLKPG DLVFFSNGGK TIDHVGVYMG ENSFAHVSTS RGVRVDRLDS RYFDKRYACA ARIIKRK
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