Gene Clim_2420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_2420 
Symbol 
ID6355891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand+ 
Start bp2650192 
End bp2650815 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content52% 
IMG OID642670010 
ProductNLP/P60 protein 
Protein accessionYP_001944420 
Protein GI189347891 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAG GACGTAGCTT TTCGTCTTTT TTTACCGGCA AATCTGCTGT CTCCGGATCG 
GTCATACCGG GACTTCTCAT CCTGGGCCTC CTTTCCGGCC TGACGGGATG CAGCAGCATC 
TCAACAGGGT CGCGGTATGA TCAAGACTGC AAATATAGCT TAAAAAAGAG AAAAACATAT 
ATTTCGCGCT TCGTCCCGGG AAACCCGGAA CCAGTGGCTG CAGTGCTTCC CGTAAAAGTA 
TCCGGACAAT CGATGGAGCG GCTTTTTACG GCGGTCCGGG AGCGCCTTGG AACGGCATAC 
CGCTGGGGCG GAACAGCACT TGACGGTTTT GACTGCTCGG GCTTCGTTCA GTATCTCTAC 
GAAGACTCCT TTCAGCTGCT CATGCCGAGA ACATCATCCG ATATGGCTAC CCTTGGAGAG 
GTCGTTCCCC GGAAACAACT CAAACCTGGA GATCTCGTAT TTTTCAGCAA TGGCGGAAAA 
ACCATCGATC ATGTCGGGGT TTACATGGGG GAGAACAGTT TTGCACATGT ATCGACGAGC 
AGAGGAGTAA GGGTTGACCG GCTTGATTCG CGCTACTTCG ACAAACGGTA TGCCTGCGCT 
GCCCGGATCA TAAAAAGGAA GTGA
 
Protein sequence
MKTGRSFSSF FTGKSAVSGS VIPGLLILGL LSGLTGCSSI STGSRYDQDC KYSLKKRKTY 
ISRFVPGNPE PVAAVLPVKV SGQSMERLFT AVRERLGTAY RWGGTALDGF DCSGFVQYLY 
EDSFQLLMPR TSSDMATLGE VVPRKQLKPG DLVFFSNGGK TIDHVGVYMG ENSFAHVSTS 
RGVRVDRLDS RYFDKRYACA ARIIKRK