Gene Clim_2414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_2414 
Symbol 
ID6355885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand+ 
Start bp2644223 
End bp2645344 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content54% 
IMG OID642670004 
ProductBeta-N-acetylhexosaminidase 
Protein accessionYP_001944414 
Protein GI189347885 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1472] Beta-glucosidase-related glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACAAA AAACACTCTT TGCCGCTCTC TTCATCTTCA TGCAGCTCTC TTCGCTTCCA 
GCGCAGGCCG CTGCTCCAGT TGACAGTCTT TCCATAAAAA TCGGCCAGAT GCTTATGATC 
GGGTTCCGGG GGCTGACAGC GAAAGCGCCC GGAATAGCTG ACGATATCCG CAAGCGTCAT 
ATCGGCGGCG TGGTGCTATT CGATTATGAT GTACCATTGA AATCACCGGT ACGGAATATC 
GCTGGCCCCG AGCAGCTGTC GAAACTAACG CGTGAGCTGA TGGATCTTTC GGAAATCCCG 
CTGTTCATCG CGCTTGACCA GGAAGGCGGA AAGGTGAACC GTCTGAAAAC CTCAAAGGGA 
TTTCCCCCCT CGGTTTCAGC TGCACACCTC GGCATGCTCG ATAACCCGGA CAGCACAACC 
GCCGCAGCGC GACAGACCGC CGCGACGCTG AAAAAAATGC ACCTGAACAT GAACCTTGCG 
CCGGTGCTCG ACCTGAACAC CAATTCTGAG AATCCGGTCA TCGGCAAACT TGGTCGCAGC 
TACTCCGCTG ATCCTGCAGT CGTCACGCGT CATGCCGGGC TGACGGCGAG AGTTTTTCGT 
GAAGAGGGAA TCATTCCGGT CTTCAAACAC TTTCCGGGGC ACGGCAGCTC AACAACGGAC 
TCCCACAAGG GCTTCACGGA CGTTACCGCA AGCTGGACGA AAAAAGAGAT TGAACCGTAC 
CGTTCGTTGA TCGCGGCCGG CTACGACGAT GCCGTCATGA CAGCTCATGT GTTCAACAGG 
CAGCTTGACG ACCGCTATCC GGCCACACTT TCGCAGAAGG TACTGAACGA CCGTCTGCGC 
AGCAGACTCC GCTTCGACGG AGTTATCCTG AGCGATGATA TGCAGATGAA AGCCATTGCC 
GACCAGTTCG GACTTGAAGA TGCCATCAGA CTGGCTCTCG ATGCAGGAGT GGATATCCTG 
ATCTTTGGCA ACAACACCAC ATTCGATCCC GCAATTGCTG AAAAAGCCAC AGCAATCCTC 
CATGAGCTTG TACAAAACGG TACGGTAAGC CGAGCCCGTA TTGACCGCTC CTACCGGAGA 
ATCATGGCTC TCAAGGAACG CTACCTCTAC CACTGCAAAT AA
 
Protein sequence
MIQKTLFAAL FIFMQLSSLP AQAAAPVDSL SIKIGQMLMI GFRGLTAKAP GIADDIRKRH 
IGGVVLFDYD VPLKSPVRNI AGPEQLSKLT RELMDLSEIP LFIALDQEGG KVNRLKTSKG 
FPPSVSAAHL GMLDNPDSTT AAARQTAATL KKMHLNMNLA PVLDLNTNSE NPVIGKLGRS 
YSADPAVVTR HAGLTARVFR EEGIIPVFKH FPGHGSSTTD SHKGFTDVTA SWTKKEIEPY 
RSLIAAGYDD AVMTAHVFNR QLDDRYPATL SQKVLNDRLR SRLRFDGVIL SDDMQMKAIA 
DQFGLEDAIR LALDAGVDIL IFGNNTTFDP AIAEKATAIL HELVQNGTVS RARIDRSYRR 
IMALKERYLY HCK