Gene Clim_2405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_2405 
Symbol 
ID6355876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2635284 
End bp2636717 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content51% 
IMG OID642669995 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001944405 
Protein GI189347876 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0868256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAGG TAGTTATTAT AGGCGCCGGC TTTGCAGGGC ATACTGCCGC GATGTATCTG 
GGCGATGCGA TAGGCAAGGA TCATGAAATA ACGGTCGTTC ATAAATTCGA TTATTTCGGT
TTTGTGCCTT CATGGGTCTG GCTGGGTATC GATGCGGTCA AGCCCGAACA TACTGTTTTC
AAGTTAAAGC CGATCTATGA CAAATTCAAT GTTAATTTTG TGCAGGGTAC CGTGACATCG
GTTCATCCCG ACGAAAATTA CATTATTCTC GACCAGGCAA ACAATGCCGG ACCGGCAAGC
CTTGAATACG ACTATCTGAT CATTGCAACC GGTGCGCATA TGAACTATGA TGCCACACCG
GGTCTCGGAC CGAAAAAGTT CACCCAGTCG ATCTGCCATT TCGATACCGC CATTCAGGCT
CGCGACGCCT ATCTGCAGTC GGTTGAACGG ATGAAGCGGG GCGAAAAGCA GAAGCTGGTC
ATCGGCACCG GCCATCCGCT TGCAGCATGT CAGGGAGCTG CGTTCGAGTA TATCACCAAC
ATTCATCACG ACCTTACCCA GAGAGGTATA CGGGAGAAAG CCGAACTGGT TTATCTCACC
AATGAGCCGG AAATCGGCGA TTTCGGAGTT GGCGGTATCA ATGTCGTGAC AAAGGGCGGT
CGGATTGCCA GGGGCGGCGA TCTTATCGAG GATGCCATGG ACGAATTCGG TATCGGCAAA
GCCGTTCGCA AGGGGGTTAA GGAGGTTGAT GCCAAAAAAG TCTATTGGGA GGACTTCGAA
GGCAACTACG GTGAGACCGA TTACGATTTC GCCATGCTCA TTCCCCAGTC TCGCGGCGTT
AACTTCAAGT TTTTCGACAA GGAAGGAAAA GATATCTCTT CAACGGTATG CAACCCAGGA
GGCTTTGTAT TCGCTGACGG CATCTATGGC CTGAAATACG ATGACCTGGT TAAAAATGCA
AACGCCTGGC CGGCTCAGTA CTACAATCCG ACCTACAAGA ACATCTTCTC GGCGGGTATC
GCGTTTGCGC CTCCAGGTCC GATTTCCGTT CCGCATACAA CAAAGAACGG TACGGTCATT
ACTCCGGGAG CGCCGAGAAC AGGCATGATT TCAGGTGTGA TCGGCAGGGT TGTGGCTTTC
AACGTGATCG ACATGATCAA GACCGGACGG ATGACACACC GCGAGCGCAT GTCCGAAATG
CTGGCCGTCT GTATCGCTTC GAACGGCAAG TCGCTCTGGA ACGGTTCGGC AATCGTGATG
ATCATCTATC CTATCGTACC TGACCATACG CGTTACGACA ACAAGGAGGG ACGCGACATG
TTCGTTACCA AGGTGGAACG CGGTATTTCC GGCGCATGGC TCAAACAGAT GGTTGAAACC
ACTTTCATGC ACAAGTTCCA GGGCCGTATC GGCTGGCAGT TCATTCCGGA ATAA
 
Protein sequence
MAKVVIIGAG FAGHTAAMYL GDAIGKDHEI TVVHKFDYFG FVPSWVWLGI DAVKPEHTVF 
KLKPIYDKFN VNFVQGTVTS VHPDENYIIL DQANNAGPAS LEYDYLIIAT GAHMNYDATP
GLGPKKFTQS ICHFDTAIQA RDAYLQSVER MKRGEKQKLV IGTGHPLAAC QGAAFEYITN
IHHDLTQRGI REKAELVYLT NEPEIGDFGV GGINVVTKGG RIARGGDLIE DAMDEFGIGK
AVRKGVKEVD AKKVYWEDFE GNYGETDYDF AMLIPQSRGV NFKFFDKEGK DISSTVCNPG
GFVFADGIYG LKYDDLVKNA NAWPAQYYNP TYKNIFSAGI AFAPPGPISV PHTTKNGTVI
TPGAPRTGMI SGVIGRVVAF NVIDMIKTGR MTHRERMSEM LAVCIASNGK SLWNGSAIVM
IIYPIVPDHT RYDNKEGRDM FVTKVERGIS GAWLKQMVET TFMHKFQGRI GWQFIPE