| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_2400 |
|---|
| Symbol | |
|---|
| ID | 6355871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | + |
|---|
| Start bp | 2630659 |
|---|
| End bp | 2632875 |
|---|
| Gene Length | 2217 bp |
|---|
| Protein Length | 738 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642669990 |
|---|
| Product | molybdopterin oxidoreductase |
|---|
| Protein accession | YP_001944400 |
|---|
| Protein GI | 189347871 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0425196 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCATG GCCAGAACTT CAGCCGCCGG GACTTCATAA AGATATCTTC GATTTTCCTT
GCAGGATCTA CCGCCTTGTC AGCCGGTGCT GCGCAGGCGT TTTCCGGAGC TGGCTCATCC
GTTGGGGATG AAGGAAGCAA GGTGGTCTAT TCATTCTGTG AGCACTGCTT CTGGCGTTGC
GGTATCGCTG CGCATGTCCG CGACGGCAAG GTGTACAAGA TCACCGGATC CGACCACCAT
CCTCTCAGCC AGGGCAAACT CTGCCCGAGA GGCACCGGAG GTACGGGACT GCTCTACGAT
CCCGACCGCC TTGCCTATCC TCTTATCCGC GAAACAAAAG GCAGAAAACA ATTTTACAGG
AAAGCGACCT GGGATGAGGC GATCACGCTT GTCGCAGAAA AGCTCTACGG CATCAAAGAG
CAATACGGCC CCGGAGCGCT TGCCATGCTC CACCATGGCT ACGGCGTATC CTTTTTCAAG
AACATGTTCT CGCAGATCGG CGTGAACAAA TATGCAAAAC CCTCCTACGA CCTCTGCTGC
GGCCCCGCCC GTCAGGCAAC AGTACTGACC TATGGCTATC CGAGCGACAC TCCTGAAGGG
TTCGATATAA AAAACAGCAA GTACATGGTT TTCTTCGGCA CCCATTTCGG AGAGAACATG
CACAACACTG CAGTACAGGA GATCTCCGAA GGCATTCGCA ACGGAGCGAA GATCGTAGTA
TTCGATCCGC GATTCTCCAC ACTTGCCGGA AAAGCCGAGC ACTGGCTGCC CATCAAGCCG
GCAACCGATA TAGCCATGAT GCAGGGACTC ATGCATGTGC TCATCAGCGA GAACATCTAC
GATAAAGCGT TTGTAGAGGC GCACACCGTC GGCTTCGGCG AACTCTGGGA TTCGGTAAAG
GATATGACAC CCGAGAAGGT TTCGGCCATT ACCGATATTC CGGCAGATGC GATCCGAACG
GTTGCCCGCG AATACGCCTT CCATGCACCC GCAGCCTTCG TGCACAGCGG ACGGCGCACC
AACTGGTATG GCGACGCGCT GCAGCGGATC CGGGCCATCC ATATCCTCAA TGCGCTGGTA
GGAAATTTCA AGATGCCCGG CGGTGTGGTT GCTTTCCAGA AGTTCCCGCT GGTACAACCG
CCTCCGACCC ATGAACATCC TGCCTATGAA AAAGAGGTGC ACAGCAAATA TCCGTTCTTC
CCGGATGATG AGCCATCGAA TACCATCGCC TCGCATGAAA TCGTGCAGCA GGCCATTTCC
GGAGAGGTCA AGGGACTGTT GATTTACGGC GTTAACCTTC CTGAAACCAT GACTCTCGGC
CGGGACAAGG CTATTGAAGC CATGAGGAAA GCTGAGTTCG TGGTTGCTGT GGACGTTCTT
CCTTCAGAGG TTACCGGCTA TGCCGACGTG GTGCTGCCTG AGTGCACCTA TCTGGAACGG
TATGATGATC TTGACAACGG CCGAGCCTTC CGTACTCCGT TCGTTGCGCT TCGCCAACCC
GCCGTGCCGC CTATGTACGA TTCGAAGCCA GGCAACCAGA TTGCGAAAAT GATTACCGAG
AAATGGGGCA TTCATGGAGC GTTCCCGCCG AGCGTTGAAA AAGGACTCGA CAAAAAGCTC
AAGCTGGTAG GCAGCTCGCT TGCGGAGATC AAGAAAAAAG GGGTGCTGGT GATGCCTGAA
ACCGATCTCT ACCGCAAGCC TGGTGAACCA CTCAACCTGA AAACCCCGAG CGGCAAGGTC
GAACTGGCGT CGGCCCGTCT CAAAGCCGGA GGATTCGACT CCGTACCAAA ATATACCGCG
CATCCCGAAC CGCCGACCGG CTACTACCGG ATGCTGACGG GACGCAAGCC CATGCTGACG
TTCGGCCGTA CAGCGAACAA CCGCTTTCTT GGCGACCTTG CTACAGCGAA AGAGAACGAG
GTCTGGGTGA ACAACCACAT AGCAGAAAAG CACAGTCTTG AAAACGGCGA ATATGTGCAC
CTGAAAAACC AGGACGGTGT GGTTTCCGAG TTCCCGGTGA AAGTGAAGGT CACCCAGCGT
ATCCGTACCG ATGCGGTTTA CATGGTTCAT GGTTTCGGGC ACACCTCGGC CAAGCTCACC
TGGGCTCACA AACGGGGAGC ATCGCACAAC CAGCTTATAT CGAGAACCGA AATAGACCCG
GCAATGGGCG CCGTCGGGTT CCAGAACAAT TTTGTGACAT TCATCAAGGA GGCATAA
|
|---|
| Protein sequence | MSHGQNFSRR DFIKISSIFL AGSTALSAGA AQAFSGAGSS VGDEGSKVVY SFCEHCFWRC
GIAAHVRDGK VYKITGSDHH PLSQGKLCPR GTGGTGLLYD PDRLAYPLIR ETKGRKQFYR
KATWDEAITL VAEKLYGIKE QYGPGALAML HHGYGVSFFK NMFSQIGVNK YAKPSYDLCC
GPARQATVLT YGYPSDTPEG FDIKNSKYMV FFGTHFGENM HNTAVQEISE GIRNGAKIVV
FDPRFSTLAG KAEHWLPIKP ATDIAMMQGL MHVLISENIY DKAFVEAHTV GFGELWDSVK
DMTPEKVSAI TDIPADAIRT VAREYAFHAP AAFVHSGRRT NWYGDALQRI RAIHILNALV
GNFKMPGGVV AFQKFPLVQP PPTHEHPAYE KEVHSKYPFF PDDEPSNTIA SHEIVQQAIS
GEVKGLLIYG VNLPETMTLG RDKAIEAMRK AEFVVAVDVL PSEVTGYADV VLPECTYLER
YDDLDNGRAF RTPFVALRQP AVPPMYDSKP GNQIAKMITE KWGIHGAFPP SVEKGLDKKL
KLVGSSLAEI KKKGVLVMPE TDLYRKPGEP LNLKTPSGKV ELASARLKAG GFDSVPKYTA
HPEPPTGYYR MLTGRKPMLT FGRTANNRFL GDLATAKENE VWVNNHIAEK HSLENGEYVH
LKNQDGVVSE FPVKVKVTQR IRTDAVYMVH GFGHTSAKLT WAHKRGASHN QLISRTEIDP
AMGAVGFQNN FVTFIKEA
|
|---|
| |