Gene Clim_2394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_2394 
Symbol 
ID6355865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2621291 
End bp2622586 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content59% 
IMG OID642669985 
Productglutamate-1-semialdehyde aminotransferase 
Protein accessionYP_001944395 
Protein GI189347866 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0001] Glutamate-1-semialdehyde aminotransferase 
TIGRFAM ID[TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCAGC TAACCAAATC TGCAGAGCTC TTTGAGCTTG CAAAGAAGTT CATCCCCGGC 
GGCGTCAACT CCCCGGTCCG TGCCTTCAAA TCCGTAGGCG GAACCCCGAT CTACATGGCC
AAGGGTGAAG GCGCCTACAT GACCGACGTT GACGGCAACA CCTACCTGGA TTATGTCGGG
TCATGGGGCC CGTTCATTCT CGGCAGCATG CAGCCCCGCG TTACCGCTGC CATCGAGTAC
ACCCTGCGGA ACATCGGCAG CAGCTTCGGC ACACCGATTG AAATGGAAAT CGAAATTGCC
GAACTGCTCT CCAGAATCGT ACCATCCATC GAAATGGTGC GCATGGTGAA CAGCGGAACC
GAGGCAACCA TGTCGGCCGT GCGGCTTGCC CGCGGGTACA CCGGCCGTGA CAAAATCATC
AAATTCGAGG GCTGCTACCA CGGCCACGGC GACAGCTTCC TCATCAAGGC CGGCTCAGGC
GTGCTGACCC TCGGCTCCCC TGACAGCCCC GGCGTCACCA AAGGCACTGC CGCGGACACC
CTGAACGCAA CCTATAACGA TATCGAATCG GTCAGACTGC TGGTCAACGA GAACAGAGGC
GACATCGCCG CCATCATCAT CGAACCGGTT GCAGGCAACA CCGGCGTCAT TCCGGCTAAG
AAAGAGTTCC TCGTTGCTCT GCGTGAGCTT TGCGACCAGG AAGGCATCGT CCTGATTTTC
GACGAGGTAA TGTGCGGCTT CCGGGTTGCC CTCGGCGGCG CTCAGGAGCT TTATGGCGTC
ACCCCCGACC TCACCACGAT GGGCAAGATC ATCGGCGGAG GCCTCCCTGT CGGCGCATTC
GGCGGCAAGC GCAAAATCAT GGAAAACGTT GCTCCGCTTG GCTCAGTCTA TCAGGCCGGC
ACACTTTCGG GCAACCCGCT CGCACTGACC GCAGGCCTGG AAACCCTGAA AATCCTCATG
GAGGAGGATC CCTATCCGGA ACTCGAACGG AAGGCGGCAT TCCTCGAAGC GGGCTTCAGG
GAGAACATGC AGAAGCTCGG CCTGAACTAC GTGCAGAACC GCGTAGGCTC CATGGCATGC
CTCTTCTTTA CCGAAACGCC TGTTGTGGAC TACAAGAGCG CCATCACCGC CGATGTCGCA
AAATACGGCA AGTACTTCCA CTCCATGCTC GACCAGGGCA TCTACCTTGC CCCGTCGCAG
TTCGAGGCCA TGTTCACCAG TTACGTGCAC TCGGACGAGG ATCTGGAGAA AACTGTCAAA
GCGAACTACA ACGCCCTCGT CGCCGCACAC CAGTAA
 
Protein sequence
MPQLTKSAEL FELAKKFIPG GVNSPVRAFK SVGGTPIYMA KGEGAYMTDV DGNTYLDYVG 
SWGPFILGSM QPRVTAAIEY TLRNIGSSFG TPIEMEIEIA ELLSRIVPSI EMVRMVNSGT
EATMSAVRLA RGYTGRDKII KFEGCYHGHG DSFLIKAGSG VLTLGSPDSP GVTKGTAADT
LNATYNDIES VRLLVNENRG DIAAIIIEPV AGNTGVIPAK KEFLVALREL CDQEGIVLIF
DEVMCGFRVA LGGAQELYGV TPDLTTMGKI IGGGLPVGAF GGKRKIMENV APLGSVYQAG
TLSGNPLALT AGLETLKILM EEDPYPELER KAAFLEAGFR ENMQKLGLNY VQNRVGSMAC
LFFTETPVVD YKSAITADVA KYGKYFHSML DQGIYLAPSQ FEAMFTSYVH SDEDLEKTVK
ANYNALVAAH Q