Gene Clim_2390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_2390 
Symbol 
ID6355861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand- 
Start bp2617621 
End bp2618730 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content56% 
IMG OID642669981 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_001944391 
Protein GI189347862 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAAT TACTATTGGC TGCAGGTGGC AAGCCTGGCG CACTTCTTCT TGCGCCTCTA 
TATAATGCGC TGAAAAAAAA CGGAATATTC AAGCCTGTTG CGGTTTTCGC GGCAGCACAA 
AGCGCCGAAC CTCTCAGCAG GGAGCTTGCG ACCTGTTTTG GCATCGGTGA GGCGGGGCAC 
ACCATTACCC TTGGCGAGGA CTCGCCGGGT CAACAGCTTG CCGCTGTGAT AACGGGCATG 
GAACCCATTA TCGCCCGCGA GCAGCCGGTT CTCGTGATGG TGTGCGGCAG CGACAATGCA 
GCTCTTGGTG CAGCACTTGC CGCTACGAAG CTCGGTGTGC CGGTTGCCGT TGCCGATGCG 
GGATTGCGCT GTCACGACCG TTCCGATGCC GACGAGATCA ACCGTATTCT TATCGACTCC 
ATCGCAGACC TGCATTTTAT CAGCGAGCAC AGCGGCGAGT ATAATCTGAT CAACGAAGGC 
GTTGCCGACG AGAAAGTTTT TTTTTCCGGA AACCTCTCCA TCGACACGCT TGCCGTCCTG 
ATGGAGCAGG CCGAGCGTGA CACCATTGCT GCCGAACTCG GACTTCAGCC AAAAAAGTAC 
GCGCTGGTAC TCCTGAATCC TGCCGGCGCT ATAGCTGCCA GAGAGCCGCT TGAAATGACC 
CTTCGGCTTC TTAAAAAGAT GTCCGGTTTG ACCACCGTGC TTGTGCCTCT TGCCGCAGGG 
CTCGATGAAC TCATGAAGCA GCATAAACTC GACAAGGCGT TCGGCGGGGT AGAGGGGCTC 
GTGATGATTG CTCACCCTGG TCATGCGGGC CTCTTGACTC TGTTGAGAGA CTCGGTGTTG 
CTCATCACCG ATTCCGAAGA GCTGCAGGCG GAGTCGACGG TCATGAATGT GCCCTGCCTC 
ACGATGATGG ACAACACCGC GCGTCCGGCT ACCATCGAAA TCGGCACCAA TGTACTTGTC 
GGGGTCGACG AGGAGGATAT CATGAGTCGC ATTCACGACA TTCTGCATTC CGGAGAGCAT 
GCACACAGTT CGAAGCGAAA CAAAATTCCT GAAAAATGGG ACGGAGCAGC CGCATCGCGC 
ATCGTCGAGG TGCTCGGCAG GGTGCTGTAA
 
Protein sequence
MKKLLLAAGG KPGALLLAPL YNALKKNGIF KPVAVFAAAQ SAEPLSRELA TCFGIGEAGH 
TITLGEDSPG QQLAAVITGM EPIIAREQPV LVMVCGSDNA ALGAALAATK LGVPVAVADA 
GLRCHDRSDA DEINRILIDS IADLHFISEH SGEYNLINEG VADEKVFFSG NLSIDTLAVL 
MEQAERDTIA AELGLQPKKY ALVLLNPAGA IAAREPLEMT LRLLKKMSGL TTVLVPLAAG 
LDELMKQHKL DKAFGGVEGL VMIAHPGHAG LLTLLRDSVL LITDSEELQA ESTVMNVPCL 
TMMDNTARPA TIEIGTNVLV GVDEEDIMSR IHDILHSGEH AHSSKRNKIP EKWDGAAASR 
IVEVLGRVL