| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_2379 |
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| Symbol | |
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| ID | 6355850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 2607182 |
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| End bp | 2609197 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642669971 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001944381 |
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| Protein GI | 189347852 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAATA CATTCCGTCA TACGGTACCC CACACGATCC TCGATGATTT TGACGGTCGT
CAGAGAGTCA TTATCGAAAA CGTTGCCCCC GAACTTGACT GTGGAAAATA TCCGGTCAAA
TGTGCGGAGG GAGAACGACT GCTTGTTGAG GCCGATATTT TTACCGATGG GGCCGATACC
GTTTGCGCAG CTCTCTGCTG CAGACCCTCA GGCAGCGAAA TATGGCAGCG CCATTCCATG
CTTCCTGGAG GAAACGACCG TTGGCAGGGC TTTTTCGTAA CCGGCAAACC GGGACGGTAT
GAGTATACCA TTGAAGCCTG GATCGACCAT TTTCTCACCT GGAAAAAAGG GTTGGTGAAA
AAAGTCGAAG CCGGTCAGGA TGTATCGCTT GATCTGCGTA TCGGTGCGGC ATTTGTGGAA
AAAGCAGTCG GACGGACAGA TGGGGAGAGT GCCCGGCAGT TGCTCGCTTA TGCAGAAAAA
CTGCTTGCAG ATGAGCCATC AGAAGCTGTC GAGGCCGCTT TGTCGGCAGG CCTTGAAGAG
CTGATGTCGC TTTATCCCGA CAAGTCCTGT GCTTCGCGTT ATGAGAAAGC GCTCATTCTT
GTCGTCGAGA CTCCGAAAGC GGGTTTCAGC TCCTGGTATG AGTTTTTTCC CCGTTCATGG
GGAAGCGAAC CAGGCGTGCA CGGCACCTTT CGGGACTGTT TGCGCCTGCT TCCGTTTATT
GCCGGAATGG GGTTCGACGT CGTCTATCTT CCGCCGATTC ATCCTATAGG ATTGACCAAG
CGAAAGGGGA AGAACAATGC TCTGACGGCA GGGCCTGATG AACCGGGGAG CTGCTGGGCA
ATCGGGAGCG CTGAAGGTGG TCATAAATCC GTGCATCCGC AGCTTGGTAC CATAGGAGAA
TTTTGTGCTT TCGTTGCCGA GGCGGAGCAG CAGGGTATTG CTGTCGCTAT CGATATTGCA
TTTCAGTGCT CGCCGGATCA TCCCTATGTG CAGGAGCACC CCCAGTGGTT CAAGTGGCGT
CCTGACGGAA CGGTACAGTT TGCCGAAAAT CCTCCAAAGC GGTATGAGGA CATTCTGCCT
ATCGATTTCG AGACTTCGGA CTGGCAGAAT CTCTGGCTTG AACTTCGCAG TATTTTTCTT
TTCTGGATTG AAAAAGGGGT TACCATTTTC AGGGTCGATA ACCCCCATAC CAAGGCGTTT
CCGTTCTGGG AATGGGCCAT TGCGACAATT CATGAAGAGT ACCCGGAAAC GATATTTCTT
GCCGAAGCCT TTACCCGCCC CCGGTTGATG GAACGTCTTG CCAAGACCGG GTTTACCCAG
TCCTACTCCT ATTTTACGTG GCGGAATACC AAATGGGAGC TGCAGGAGTA TCTCAGGGAG
CTGAGCACGG CTCCGCTGAA GTATTATATG CGTCCGAACT TCTGGCCCAA CACGCCGGAC
ATTCTGCACG AAGAACTGCA GAGCGGCGAC CGCCGGAAAT TTATTACCCG CATGATACTT
GCTGCTACCC TCTCCTCGAA TTACGGAATG TACGGGCCGG CATACGAACT ATGCGAGCAT
CTGCCTGTAG CGCCGGGCAA AGAGGAGTAT CTCGATTCGG AGAAATACGA AATCAAGCGG
TGGGATCTCG ATCGTCCGGG CAATATCCGG GCTGAAATCA CGCTTCTCAA CCGAATCAGA
AAGGAGAACC CGGCTCTGCA GCGCACGTCG AATATCGACT TTGTGCGCAT CGATGCTTCC
GCAAGCCATG AGCACGACTG GCTGCTCGGT TATGTGAAAT ATTCCGGCGA CGAACAGAAC
ATCATTCTCA CGGTCGTCAA TCTCGACCAC TCCAATACCC AGGGAGGATG GCTCCGTTTC
CCTCTCGAGA GGTTTGGATT TTCGGCAGAC AGCAGTTTCA TGCTCGAAGA TTTGCTGACC
GGCAGACGCT ATGAGTGGCA TGGCGAGTGG AACTACGTCG AACTGAACGT TTCGGAGATG
CCCGCTCATG TATTCAGGGT AGTGTTTTTA TCATAA
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| Protein sequence | MNNTFRHTVP HTILDDFDGR QRVIIENVAP ELDCGKYPVK CAEGERLLVE ADIFTDGADT
VCAALCCRPS GSEIWQRHSM LPGGNDRWQG FFVTGKPGRY EYTIEAWIDH FLTWKKGLVK
KVEAGQDVSL DLRIGAAFVE KAVGRTDGES ARQLLAYAEK LLADEPSEAV EAALSAGLEE
LMSLYPDKSC ASRYEKALIL VVETPKAGFS SWYEFFPRSW GSEPGVHGTF RDCLRLLPFI
AGMGFDVVYL PPIHPIGLTK RKGKNNALTA GPDEPGSCWA IGSAEGGHKS VHPQLGTIGE
FCAFVAEAEQ QGIAVAIDIA FQCSPDHPYV QEHPQWFKWR PDGTVQFAEN PPKRYEDILP
IDFETSDWQN LWLELRSIFL FWIEKGVTIF RVDNPHTKAF PFWEWAIATI HEEYPETIFL
AEAFTRPRLM ERLAKTGFTQ SYSYFTWRNT KWELQEYLRE LSTAPLKYYM RPNFWPNTPD
ILHEELQSGD RRKFITRMIL AATLSSNYGM YGPAYELCEH LPVAPGKEEY LDSEKYEIKR
WDLDRPGNIR AEITLLNRIR KENPALQRTS NIDFVRIDAS ASHEHDWLLG YVKYSGDEQN
IILTVVNLDH SNTQGGWLRF PLERFGFSAD SSFMLEDLLT GRRYEWHGEW NYVELNVSEM
PAHVFRVVFL S
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