| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_2378 |
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| Symbol | |
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| ID | 6355849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 2603839 |
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| End bp | 2607138 |
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| Gene Length | 3300 bp |
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| Protein Length | 1099 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642669970 |
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| Product | trehalose synthase |
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| Protein accession | YP_001944380 |
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| Protein GI | 189347851 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases
[COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis |
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| TIGRFAM ID | [TIGR02456] trehalose synthase
[TIGR02457] trehalose synthase-fused probable maltokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCAAC CCGAACCGCT CTGGTACAAA GACGCCATCA TTTACGAAGC ACATGTCAAA
ACGTTTTACG ACAGTAACAA CGACGGCATC GGTGATTTTC AGGGACTTCG TCAAAAACTC
GGTTATCTGG AAAGTCTCGG TATTACCGCG ATCTGGCTGC TGCCGTTCTA TCCGTCGCCG
CTTCGTGACG ACGGGTACGA TATCGCCGAC TATATGTCCG TAAATCCCGA CTACGGGACG
CTCGAAGATT TCAGACAGTT CCTCGAGGAA GCGCATTCAC GCGGGATGAA AGTCATTACC
GAACTGGTTG TGAACCATAC CTCCGATCAG CACGCGTGGT TTCAGCGGGC TCGCAAAGCC
CCGGCAGGCT CTCCTGAACG GAATTTCTAT GTCTGGAGCG ACGATATGGA CAAATATTCC
GAGACCCGCA TTATTTTTCA GGATTTCGAA GCATCCAACT GGACCTGGGA TCCGGTCGCC
AAGCAGTATT TCTGGCATCG TTTCTATCAC CACCAGCCCG ATCTGAACTT TGAAAATCCG
GAAGTCCATC AGGCCCTTTT CGATGTACTC GATTTCTGGC TTGGTATGGG CGTTGACGGT
CTGAGGCTCG ATGCCGTCCC CTACCTCTAC GAGGCAGAGG GCACCAATTG CGAAAATCTT
CCCCAGACCT ACGATTATCT CAGGAAACTT CGCAGTTATG TCGACGAACA TTATCCGAAC
CGGATGCTGC TTGCCGAAGC GAACCAGTGG CCTGAAGATT CCGCCGCTTA TTTAGGCGAG
GGCGATCTGT GCCATATGAA CTTCCATTTT CCCCTGATGC CGCGCATGTA TATGGCGCTG
GCGACCGAAG ATCGTTTTCC CATTCTCGAC ATTCTCGACC AGACTCCCGA AATTCCTGAA
AACTGCCAGT GGGCCTCTTT TCTGCGCAAC CACGACGAGC TGACCCTTGA AATGGTGACC
GATGAGGAGC GCGACTACAT GCGCCGGGTC TATGCCAACG ATCCCAGAGC GCGCATCAAC
CTCGGTATCC GCAGAAGGCT TGCTCCGCTC ATGACCAACG ACCGGCGGCG TATCGAACTG
ATGAACATCA TGCTGCTCTC GCTACCCGGC ACACCGGTGC TCTACTACGG CGACGAGATC
GGTATGGGCG ACAACTATTA TCTTGGCGAC CGGGACGGTG TTCGCACTCC TATGCAGTGG
AACTCCGATC GTAATGCCGG TTTTTCTCGC GCCAACCCGC AAAAACTGCT GCTTCCGGTC
ATTATCGATC CCGAATACCA TTACGAAGCC GTCAACGTAG AGGTGCAGGA GAGCAACACC
AATTCGCTGC TCTGGTGGAT GCGGCACGCT ATCGCCACGG CAAGGCGCTA CAAGTCGCTC
AGTCGCGGCA GCATCGAGTT TCTGCAGGTG AACAACCCCA AAGTGCTGAT ATTTACCCGC
ACCTTCGAGG ATGAAACCAT GCTCGCAGTG ATCAACCTTT CCCGAAATGC CCAGGCGGTC
ACGATCGATC TGTCCGGCTA CGAAGGGTGT ATCCCCGAAG AGGTCTTCAG TCTGAACCGG
TTCCCGAAAG TTCGCGAAAC GCCCTATATG GTCGCTCTCG GAGCATACGG TTTCTTCTGG
CTTCGGCTTG TCAGAGAGAA CGCCCAGGAA GGCGGGCGTC CCTATCTTGA CTCGCCGTAT
GCGAAAGTTG CCCGCTGGCA GAGCTGTTTT GTAGGTAAAA GCCGGGAACG GCTCGAAACC
GAAATCCTTC CGAAGTACTT TATGGGCAGC CGCTGGTTCG GCGGCAAGGC AAGAACCATC
ATACGCATCG CCATTATCGA TACAATCCCG GTTGAGGGGT TGGAGCATGC CAAACTGCTG
ATTACCGAGG TAAGCTATTC AAGCGGCGAA AACGAGCGTT ATCAGCTTCC GGTCTGCTTT
ACTCCTGAAG GTGTCGTCAG CACTGCCGCC GATAACTTCT CCAGCCGGGT TATTGCGAAA
GTCGTACTTG GCGATGAGGA AGGGTATCTC TGCGATGCCA CCTATGAAAA CAGCTTTCTC
AGTCGGCTTT TCCACCTTGT TATGGGCAAC TCGGAATGGA AGGGCAAGCT CGGCAATGTC
AACGGCGTAA AAGGAGAGGC GTTCGACGGA ATTTCCAGGG ATAAGGGGAC CGGGCCCGAA
CCATTTCTGC TCGGCAACGA GCAGAGTAAC ACCTCCATCC GATATCGTGA CGATCTCTGC
CTGAAACTTT ATCGCAGAAT TGAAACAGGA GTCTCTCCCG AAGTCGAAAT GTGCCGCGCG
TTGTCGGAGA GAAGCTCGTT CGCTCAACTG CCCAATTATC TTGGGACGCT TGATTACGTT
CAGAGCCGTA CGAACAGGTA TTCCATCGGT ATTCTGCAGA GTTTCGTGCC CAATGAAGGC
GATACCTGGA AGTTGTCGCT CGATTATGTA CAGCGGTATT ATGAAGAGGT GCTTTCGAAA
CTGCAGTGCG GTATCGAACT GCCTCCGCTT CCGGCTCTTA GCGGCAATCC CGTTCCTATT
CCTCCGGCTA TGCAGGAGCT TATCGGCGGA ACCTGGCTCG GCCTGGTTGA AAAGCTTGCC
GAACGAACGG CCGAGATGCA TATCGCTCTG GCCTCGATGA CCGACCAGCC CGAGTTTGCA
CCGGAGCCCT TTACGTCGCT CTACCAGCGT TCCATCTATC AGGCGATGTG CGAGCAGGTA
AAGCGCAGTA TGATTCTGCT TCGTGAAGTG AAAGATTTCA TGATCGGCGA ACCGAAGGAA
CTGGTATTGC AGATGCTGGC CAATCAGAAA AAAATTCTGC AGCAGTTCGA ACCGATCAGA
ACCGGGAAAA TAGATACCCT GAAGGTGAGA ATTCATGGCG ATTACCATCT TGGGCAGGTA
CTCTCTACAG GCAATGACGT CGTGATTATC GACTTTGAGG GCGAGCCCTC CCGTCCGATA
TCGGAACGCA AGATCAAACG CTCGGTTTTT CGCGATGTGG CCGGCATGAT GCGTTCGTTC
GATTATGCGG CCTTCAATGT GCTTCTGCAG GCAAATCCGG TGATCAGGCA GGAGGATGTA
GCGCGCCTTG AACCATGGGC CGAGCGCTGG AGCTACTATG TGGGTCAGCA CTTTGTGGAT
TCGTATTTCA GTGCGGCAAA GGGGCATGAA ATCGTTCCCG AAGAGGCCTC TCAGCGAGAG
CACCTGCTTC GCGGCTACCT CATGAACAAG GCGGTTTACG AGTTGAATTA CGAGCTGAAC
AACCGTCCTG AGTGGGCCAC GATTCCCATG CGGGGCATTC TTAAGCTCAT CGAGTTGTAA
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| Protein sequence | MYQPEPLWYK DAIIYEAHVK TFYDSNNDGI GDFQGLRQKL GYLESLGITA IWLLPFYPSP
LRDDGYDIAD YMSVNPDYGT LEDFRQFLEE AHSRGMKVIT ELVVNHTSDQ HAWFQRARKA
PAGSPERNFY VWSDDMDKYS ETRIIFQDFE ASNWTWDPVA KQYFWHRFYH HQPDLNFENP
EVHQALFDVL DFWLGMGVDG LRLDAVPYLY EAEGTNCENL PQTYDYLRKL RSYVDEHYPN
RMLLAEANQW PEDSAAYLGE GDLCHMNFHF PLMPRMYMAL ATEDRFPILD ILDQTPEIPE
NCQWASFLRN HDELTLEMVT DEERDYMRRV YANDPRARIN LGIRRRLAPL MTNDRRRIEL
MNIMLLSLPG TPVLYYGDEI GMGDNYYLGD RDGVRTPMQW NSDRNAGFSR ANPQKLLLPV
IIDPEYHYEA VNVEVQESNT NSLLWWMRHA IATARRYKSL SRGSIEFLQV NNPKVLIFTR
TFEDETMLAV INLSRNAQAV TIDLSGYEGC IPEEVFSLNR FPKVRETPYM VALGAYGFFW
LRLVRENAQE GGRPYLDSPY AKVARWQSCF VGKSRERLET EILPKYFMGS RWFGGKARTI
IRIAIIDTIP VEGLEHAKLL ITEVSYSSGE NERYQLPVCF TPEGVVSTAA DNFSSRVIAK
VVLGDEEGYL CDATYENSFL SRLFHLVMGN SEWKGKLGNV NGVKGEAFDG ISRDKGTGPE
PFLLGNEQSN TSIRYRDDLC LKLYRRIETG VSPEVEMCRA LSERSSFAQL PNYLGTLDYV
QSRTNRYSIG ILQSFVPNEG DTWKLSLDYV QRYYEEVLSK LQCGIELPPL PALSGNPVPI
PPAMQELIGG TWLGLVEKLA ERTAEMHIAL ASMTDQPEFA PEPFTSLYQR SIYQAMCEQV
KRSMILLREV KDFMIGEPKE LVLQMLANQK KILQQFEPIR TGKIDTLKVR IHGDYHLGQV
LSTGNDVVII DFEGEPSRPI SERKIKRSVF RDVAGMMRSF DYAAFNVLLQ ANPVIRQEDV
ARLEPWAERW SYYVGQHFVD SYFSAAKGHE IVPEEASQRE HLLRGYLMNK AVYELNYELN
NRPEWATIPM RGILKLIEL
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