Gene Clim_2358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_2358 
Symbol 
ID6355704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2587552 
End bp2588970 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content52% 
IMG OID642669950 
ProductNa+/solute symporter 
Protein accessionYP_001944360 
Protein GI189347831 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0591] Na+/proline symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.552943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATGCTG CCGATATAGC AATCATCGTC TTTTTTCTTG CCGGGAGCAT CCTGCTCGGC 
CTCTGGCAGG GCAAAAGCAA TAAAAATACC GGCGACTACT TTCTCGGAGG CCATAAGCTT
CCCTGGATTG TAGCCATGCT CTCCATCGTT GCGACAGAGA CCTCGGTACT GACCTTCGTC
AGTGTGCCGG GACTTGCCTA CCGGGGAGAC TGGACCTTTC TGCAGCTGCC TCTCGGCTAT
ATATTCGGAA GAGTGCTGGT GAGCGTATTT CTTCTGCCTG TTTATTTTAA AAATGGCGTC
AGCTCCATTT ATGAAATCAT CGGATCGAGA TTCGGCACCG GCATGCAGAA GCTCGCATCT
GTGGTCTTTC TCGTAACCCG CATTCTCGGC GACGGAGTGC GGTTTCTCGC GACAGGCGTG
GTCGTTCAGG TGGTTACCGG CTGGTCCCTT CCCCTGTCGG TGCTCATCAT AGGCCTCGTC
ACTCTGGTTT ATACCATTTC AGGCGGTCTG AAAACCGTGG TCTGGCTCGA CAGCATCCAG
TTCGGCCTTT ACCTCCTGGG CGGGATCATC ACCATCGTCT TTATTGTTCT CAACCTTGAG
GCAAGCCCTC AGGAGATCTA CTCTGCGCTT GCAGCGTCAG GAAAGCTCAC GGTTCTGAAT
ACGAAAGGCA GCCTGCTGTT CGATCCCATG ACGTTCGGAA GCGCCTTTAT CGGCGGTATC
TTTCTTTCGT TTGCATCACA CGGCATCGAC TATATGATGG TCCAGAGGGT ACTCGGCTGC
AGCGACCTCG GCTCGGCACG AAAAGCGCTG ATCGGCAGCG GGCTTTTCGT TTTTTTGCAA
TTCATGATCT TCCTGCTTGC AGGATCACTC ATCTATCTGT TTATGCATGG CGCGACAACG
GTAAAGGACA GGGAATTCGC CACGTTTATC GTTGATTATC TCCCTTCCGG CCTCAAAGGC
CTGCTGCTTG CCGGCATCCT CTCGGCAGCA ATGTCGACCA TTGCCTCCTC GATCAACTCG
CTTGCGGCAT CAACCGTTAC CGATCTCATG GGTGGCCGGG CGTCGCTGAA TCTCTCCCGA
ATCATCAGCG CGGCATGGGC AGCCGTGCTT ATCGGCATCG CCCTTTTATT TGATGAAAAC
GACAAAGCCA TCATTATGGT CGGACTTGAA ATTGCGTCCT TTACCTATGG CGGTCTTCTC
GGGCTCTTTC TGCTATCAAA AACAAAAAAA CATTTCCAAA CGGCAAGTCT GGCCGTCGGT
CTGCTTGCAA GCATGGGCAT CGTATTCGTA CTGAAGCATT TCGGAATAGC CTGGACATGG
TATATACTGC TCTCCGTCAT ATTCAACCTG CTTATCGTAT TTTCTCTCGA TCCACTAATC
GGCAGGCTCC GGAAGCAATC AAAAGAGACT CCGGACTGA
 
Protein sequence
MHAADIAIIV FFLAGSILLG LWQGKSNKNT GDYFLGGHKL PWIVAMLSIV ATETSVLTFV 
SVPGLAYRGD WTFLQLPLGY IFGRVLVSVF LLPVYFKNGV SSIYEIIGSR FGTGMQKLAS
VVFLVTRILG DGVRFLATGV VVQVVTGWSL PLSVLIIGLV TLVYTISGGL KTVVWLDSIQ
FGLYLLGGII TIVFIVLNLE ASPQEIYSAL AASGKLTVLN TKGSLLFDPM TFGSAFIGGI
FLSFASHGID YMMVQRVLGC SDLGSARKAL IGSGLFVFLQ FMIFLLAGSL IYLFMHGATT
VKDREFATFI VDYLPSGLKG LLLAGILSAA MSTIASSINS LAASTVTDLM GGRASLNLSR
IISAAWAAVL IGIALLFDEN DKAIIMVGLE IASFTYGGLL GLFLLSKTKK HFQTASLAVG
LLASMGIVFV LKHFGIAWTW YILLSVIFNL LIVFSLDPLI GRLRKQSKET PD