Gene Clim_2346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_2346 
Symbol 
ID6355692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand- 
Start bp2576558 
End bp2577238 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content51% 
IMG OID642669938 
Productbeta-lactamase domain protein 
Protein accessionYP_001944348 
Protein GI189347819 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAAAA AACCGCCTGA AAGGCTTAGT AATACCGTTA TGTTTGTCAA GCAGTTTCGT 
ACCGGAGGCG ACAGGAATTT CGGCTATCTT GCCGCTGATG AACCCTCCGG AGACGCCCTG 
ATCGTCGATG CTTCTTACGA TCCGTGTTCC ATTGCCGAAT ACGCTGTTCG GCAGGGATAT 
CGCATCCGCT ATGTATTTTC CTCGCACGGC CATGCCGATC ATACGAACGG AAACGAACAG 
ATGGAGCGGC TGACGGGTCT CAAACCGCTG CTTTACGGGG ATATCTGTCC GGTTACAGGG 
GTCAGGGTAG AGGATGGAGC GGTTTTGCCT CTCGGCAGCC TCGAGGTTCA AATAATGCAT 
ACGCCGGGTC ATACCCGGGA CTCCATCTGC CTCTATGTCG GAGATGCGCT TTTTACCGGT 
GATACACTCT TTACAGGAAA GGTTGGTGGC ACCTGTACCG ACGAAGAGGC AAAAGAGGAA 
TACGAATCAT TACACGGCAG GATTCTGCAG CTTCCCGTAG CGACGACGGT CTATTCCGGG 
CATGATTACG GCGAACGTCC ACACTCGACT CTCGCTGAAG AAAAGGTCTC CAATCCATTT 
CTTCTTCAGT CGGATTTCGA GGCATTTCTT TTCCTGAAAA ACAACTGGGC CGCTTATAAA 
AAAGCTAATG GGATAAAATA A
 
Protein sequence
MLKKPPERLS NTVMFVKQFR TGGDRNFGYL AADEPSGDAL IVDASYDPCS IAEYAVRQGY 
RIRYVFSSHG HADHTNGNEQ MERLTGLKPL LYGDICPVTG VRVEDGAVLP LGSLEVQIMH 
TPGHTRDSIC LYVGDALFTG DTLFTGKVGG TCTDEEAKEE YESLHGRILQ LPVATTVYSG 
HDYGERPHST LAEEKVSNPF LLQSDFEAFL FLKNNWAAYK KANGIK