| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_2341 |
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| Symbol | hemE |
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| ID | 6355687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 2570962 |
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| End bp | 2572017 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642669933 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_001944343 |
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| Protein GI | 189347814 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAAAA ATGATCTATT TCTCCGGGCA TTGAAGCGTC AGCCCTGTTC CAGGACGCCT
ATCTGGGTGA TGAGACAGGC CGGCCGCTAT CTTCCGGAGT ATCGGGCAGT CAGAGAAAAA
ACTGACTTTT TAACCCTTTG CAAAACGCCT GAACTGGCCG CCGAGGTAAC CATTCAGCCT
GTTGATCTGA TGGGTGTCGA TGCCGCGATC ATCTTTTCCG ACATTCTTGT GATCAATGAA
GCCATGGGAA TGAACGTCGA GATTATCGAG ACAAAAGGAA TCAAGCTTTC TCCTGTCATC
CGCAGCAAGG CAGATATCGA CAAGCTCATC GTGCCCGATA TCGATGAGAA GCTCGGCTAT
GTTATGGATG CCCTGCGTCT TACCAAGAAA GAACTCGACA ATCGCGTTCC GCTTATCGGT
TTTTCCGGTG CCGCATGGAC GCTCTTTACC TATGCAGTGG AAGGCGGCGG CTCGAAGAAC
TACGCTTTTG CCAAGAAAAT GATGTACCGT GAGCCGCAGA TGGCCCATCT TCTGCTCGGC
AAGATTTCCG AAACCATCAG CGCCTATCTG CTCAAGCAGG TCGAGGCCGG TGCCGACGCA
ATCCAGATTT TCGATTCATG GGCAAGCGCT CTCTCCGAGG ACGATTATCG TGAATTCGCT
CTTCCTTACA TCAAGCAGAA TGTTCAGGCT GTCAAGGCGA AGTATCCAGA CATTCCCGTT
ATCGTATTTT CGAAAGACTG CAACACCATT CTTTCCGATA TTGCTGATAC CGGCTGCGAT
GCCATGGGTC TTGGATGGGG CATAGATATC GCAAAAGCCC GTGCCGAGCT CAAGGACCGA
GTCGCCCTGC AGGGTAATCT CGATCCGACA GTGCTCTACG GCACCCCTGA AAAGATCAAG
TCGGAAGCAG CAAAAGTCCT GAAACAGTTC GGTCAGCACA CCGAAAGCTC AGGTCATGTT
TTCAACCTCG GACATGGTAT TCTTCCCGAT GTCGATCCGG CAAACCTGAA GCTTCTTGTC
GAATTCGTCA AGGAAGAGAG CGCCAGGTAC CACTGA
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| Protein sequence | MLKNDLFLRA LKRQPCSRTP IWVMRQAGRY LPEYRAVREK TDFLTLCKTP ELAAEVTIQP
VDLMGVDAAI IFSDILVINE AMGMNVEIIE TKGIKLSPVI RSKADIDKLI VPDIDEKLGY
VMDALRLTKK ELDNRVPLIG FSGAAWTLFT YAVEGGGSKN YAFAKKMMYR EPQMAHLLLG
KISETISAYL LKQVEAGADA IQIFDSWASA LSEDDYREFA LPYIKQNVQA VKAKYPDIPV
IVFSKDCNTI LSDIADTGCD AMGLGWGIDI AKARAELKDR VALQGNLDPT VLYGTPEKIK
SEAAKVLKQF GQHTESSGHV FNLGHGILPD VDPANLKLLV EFVKEESARY H
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