Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_2297 |
Symbol | |
ID | 6355642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 2529945 |
End bp | 2531006 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642669888 |
Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
Protein accession | YP_001944299 |
Protein GI | 189347770 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0294499 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTT TAGGAATAGA AACCAGCTGC GATGAAACAT CGGCAGCGGT ACTGCTCGAC GGCAGAATCG GTTCAAACGT TATCAGTTCA CAGCGCTGTC ATACCAGCTT CGGAGGAGTC GTTCCGGAAC TTGCATCGAG AGAACACGAA CGGACAATAG TGTCCATTGT CAACAGCGCG GTAACTGAAG CCAATATAAC GAAAAATGAA CTCGATTGCA TAGCCGCCAC CGCCGGCCCG GGTCTTATCG GCGCGGTTAT GGTAGGACTC TGCTTCGCCG AAGGCATGGC GTTCGCTCTC GGCATTCCGT TCGTTCCGGT GAACCATATC GAGGCGCATA TGTTTTCGGC CTTCATTCCC GAATCGCCGG AACACAAGTC TCCTGAAGGC CCCTTTATCT CGCTGACCGT ATCCGGAGGC CATACGCTTC TTTCGCTTGT CCGCGAAGAT CTCTCCTATG ACGTGATCGG AAAAACGCTC GATGACGCCG CAGGGGAGGC TTTCGATAAA ACCGGCAAGA TGCTCGGCCT CGCATATCCC GCGGGGCCGG TTATCGACCG CCTTGCGGCA TCGGGGAATC CTCACTTCCA TGCTTTTCCC AAAGCCCTGA CGTCGAGTTC GCAAACCAGC AGAAGCTATC GGGGCAACTT CGATTTCAGC TTTTCGGGCC TGAAAACCTC GGTGCTGACC TGGCTGCAGA AGCACCCGGC AGAGTTCATA CAAACCCATC TGCATGATAT CGCCGCATCG ATACAATACG CCATTGTAAG CGTTCTGACA GAAAAAGCCG TTGCGGCTGC GCGGTATTTC CGTACCGACG CCATCTCCGT AGCCGGAGGG GTCAGCGCCA ATTCGGCATT GAGAACGGCG ATGCAGGAAG CCTGTCGGCA CCACGGTATC CGATTGTATA TACCCGGCAC GGTATATTCG ACCGACAATG CCGCCATGAT AGCCTCGCTT GCCGGTCTCA TGCTCTCGAA AGGCGCCGTG CGGAAAAACA ATTATGACGT CGCTCCATTC GCAAGCTTTG CCGCGGGAGC GATCAAGGCA TCATTGAAAT AA
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Protein sequence | MNILGIETSC DETSAAVLLD GRIGSNVISS QRCHTSFGGV VPELASREHE RTIVSIVNSA VTEANITKNE LDCIAATAGP GLIGAVMVGL CFAEGMAFAL GIPFVPVNHI EAHMFSAFIP ESPEHKSPEG PFISLTVSGG HTLLSLVRED LSYDVIGKTL DDAAGEAFDK TGKMLGLAYP AGPVIDRLAA SGNPHFHAFP KALTSSSQTS RSYRGNFDFS FSGLKTSVLT WLQKHPAEFI QTHLHDIAAS IQYAIVSVLT EKAVAAARYF RTDAISVAGG VSANSALRTA MQEACRHHGI RLYIPGTVYS TDNAAMIASL AGLMLSKGAV RKNNYDVAPF ASFAAGAIKA SLK
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