Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_2287 |
Symbol | gatB |
ID | 6355632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 2520255 |
End bp | 2521682 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642669878 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
Protein accession | YP_001944289 |
Protein GI | 189347760 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.888544 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATATG AATTAGTTGT GGGCCTCGAG GTCCACTGTC AGCTCAATAC CAACAGCAAG GCGTTCTGCG GCTGTTCAAC CCGATTCGGC AATCCCGCCA ACACCAATGT GTGCCCGGTC TGTCTGGCTC TTCCGGGAGC CCTGCCGGTG CTGAACCGTC GCGTTGTCGA GGATGCCGTC AAGCTCGGCC TGGCAACCGG CTGCTCGATC GCCCCGAGCT CCATTCTTGC CAGAAAGAAC TATTTCTACC CCGATCTTCC GAAAGGGTAT CAGATATCCC AGTTCGAAGA ACCGATCTGC ACCGAAGGCA TGCTGCGTAT CGATGTCGGG GACGGGTGCC GCGACATCAG ACTGATCAGG ATCCATATCG AGGAAGACGC CGGCAAGTCG ATTCACGATA TCGGCGACGA CACCTATATC GACGTGAACC GTTGCGGCGT GCCGCTTCTT GAAATTGTCA GTTACCCCGA CATCCGCACA TCGAGGGAGG CGTCGGCTTA TCTGCAGAAA ATGCGCCAGA TCGTGAAGTA TCTCGGTATT TCCGACGGCA ACATGGAAGA GGGCAGTCTG CGCTGCGACG CAAACGTATC GGTCAGACTT TTCGGCGCAG AGGAGTACGG TACCCGCACC GAAATCAAGA ACATGAACTC CTTCAAGAAT GTCGAGAAAG CGATCGAGTA CGAGATGCAG CGCCATATCG ACATCATCGA TGGCGGCGGA ACGATCGTGC AGGAAACCAG GCTCTGGGAT GCCGACAAGG GTGAGACCCG TTCGATGCGC GGCAAGGAGT TCGCACACGA CTACCGTTAC TTCCCCGATC CCGATCTGGT GCCGGTGCTG GTTGACCAGG AGATGCTCGA ACGAATAAGG CTCGAACTTC CCGAGTTTCC CGAAGACCGC GAGCGGCGGT TTGTCAGTGA GTACGGAATT CCGCCATACG ACGCCGGAGT TCTTACGGTC GAACGCGAGA TCGCCGATTA TTTCGAACGG ACCCTGACGG TTTGCGGCGA CGCAAAGGCG GCTTCAAACT GGGTAATGGG TGAGGTGATG CGTACGCTGA AGGAGAAATA CCTTGATATT AAGGAGTTCG CGATCTCGCC GGAGCGGCTT GGAGGATTGA TCGGGCTTAT CGGCAAAGGA GCCATCAGCA ACACCATCGC CAAACAGGTT TTCGAACTGA TGCAGACGGG CGAAGCTTCT GCCGAAGAAA TCGTCGATCG GGAAGGGCTT GCCCAGGTTT CGGATACCGG GGCAATCGAG CGGACGGTTG ACGAGATACT GGAGGCCAAC CCCAAACAGC TTGCCGACTA TCGGGAGGGA AAGACCAAGT TGTTCGGTTT CTTTGTGGGA CAGTGCATGG CCCGCATGAA AGGAAAGGCC AATCCGCAGG TCGTCAACGA TGTGCTGAAA AGCCGTCTCG ACGGGTGA
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Protein sequence | MKYELVVGLE VHCQLNTNSK AFCGCSTRFG NPANTNVCPV CLALPGALPV LNRRVVEDAV KLGLATGCSI APSSILARKN YFYPDLPKGY QISQFEEPIC TEGMLRIDVG DGCRDIRLIR IHIEEDAGKS IHDIGDDTYI DVNRCGVPLL EIVSYPDIRT SREASAYLQK MRQIVKYLGI SDGNMEEGSL RCDANVSVRL FGAEEYGTRT EIKNMNSFKN VEKAIEYEMQ RHIDIIDGGG TIVQETRLWD ADKGETRSMR GKEFAHDYRY FPDPDLVPVL VDQEMLERIR LELPEFPEDR ERRFVSEYGI PPYDAGVLTV EREIADYFER TLTVCGDAKA ASNWVMGEVM RTLKEKYLDI KEFAISPERL GGLIGLIGKG AISNTIAKQV FELMQTGEAS AEEIVDREGL AQVSDTGAIE RTVDEILEAN PKQLADYREG KTKLFGFFVG QCMARMKGKA NPQVVNDVLK SRLDG
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