| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_2276 |
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| Symbol | |
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| ID | 6355299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 2508665 |
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| End bp | 2509834 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642669867 |
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| Product | type I secretion membrane fusion protein, HlyD family |
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| Protein accession | YP_001944278 |
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| Protein GI | 189347749 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAAAT CGTTGTCAGA GATATTTCAG AGGCAAGCAA AGTCGAGTCT GATTATCATT
GCCGCCGGCA TAATTACCTT TATTTCAATC ATTTGGGCAT CTTTTGCGAA AATAGAAGAG
GTAACCCATA CGACAGGACT CGTAATAGCA AGTTCCCGCA ATCAGGTCAT CCAGTCTGCT
ATTGACGGCA TCATTCAGTC AATTCCCGTT CAGGAAGGTC AGTCTGTTCA GAAAGGTATG
GTTCTTGCCA ATCTTGAACG AACTCAGGCC GAAGCGGCAC AGTATGATAG TTTCGGCAAG
GTTGCGGCCC TCGAAGCGGC ACTTGCCCGA CTGCATGCTG AAGTGTTGGG GCGTCCTCTG
GAGTTTCCTG AAAACGTGAG GGCATATCCG CAATTCATTG AAAACCAGAC CGAGCTTTAT
CAGCGAAGAA AAGCGGCGAT TGATTCCGAG ATCAGAACTC TGCAGGAAAG TCTGCGTCTT
GCAAAAGAGG AACTGAGCAT GATGGCGCCA TTGCTTGAAA GTGGAGATGT CGGCAAAATA
GAGGTTATCC GATTGCAACG TCAGGTAGCA GAGTTGACCG GCCAGATCAA TATGAAGCGG
AACAAGTTTT TTCAGGATGC CCAACAGGAA ATGACGAAGT ACGAAGAAGA TCTCTCGACA
CAAAAGCAGC TTCTTGCCGA GAGATCGTTT GTGGTCGGAA AACTTGATGT TCGCGCACCG
GTCACCGGCA TTGTAAAAAA AATCCATCTT ACGACTCAAG GGGCTAAAGT GCGTCCAGGC
GACATCGTTA TGGAATTGCT GCCAACAGAA GGGAATCTGA TTGTCGAAGG AAAATTGAAA
CCCAGCGATA TAGGATTCGT GAAGCCCGGT ATGGCGGCTA CAGTCAAAGT AGATGCTTAC
GATTACTCCA TATATGGCGT ACTGCATGGC AAGGTATCAT ACATAAGTCC CGACGCGATT
ACCGAGCAAA CTCCGCAGGG AGAAGCTCTG TATTATCGTG TTCATGTGAA GCTCACTGAC
GAGAGCACAT CGCAAAGCAA AATATCGCTT GCAAATCTGC AACCGGGAAT GACGGTTGGC
ATTGATATCA GGACGGGCAG TAAAACCGTG CTGCAGTATC TGACGAAACC CATTACAAAG
GTTTTCGGTG AATCGTTACG TGAGCGATGA
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| Protein sequence | MLKSLSEIFQ RQAKSSLIII AAGIITFISI IWASFAKIEE VTHTTGLVIA SSRNQVIQSA
IDGIIQSIPV QEGQSVQKGM VLANLERTQA EAAQYDSFGK VAALEAALAR LHAEVLGRPL
EFPENVRAYP QFIENQTELY QRRKAAIDSE IRTLQESLRL AKEELSMMAP LLESGDVGKI
EVIRLQRQVA ELTGQINMKR NKFFQDAQQE MTKYEEDLST QKQLLAERSF VVGKLDVRAP
VTGIVKKIHL TTQGAKVRPG DIVMELLPTE GNLIVEGKLK PSDIGFVKPG MAATVKVDAY
DYSIYGVLHG KVSYISPDAI TEQTPQGEAL YYRVHVKLTD ESTSQSKISL ANLQPGMTVG
IDIRTGSKTV LQYLTKPITK VFGESLRER
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