| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_2275 |
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| Symbol | |
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| ID | 6355298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 2506528 |
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| End bp | 2508672 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642669866 |
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| Product | ABC transporter related |
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| Protein accession | YP_001944277 |
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| Protein GI | 189347748 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.405946 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAGC AAGATCCTCA GATATACGAA GTTAAGTGGC TTATAGATCG CTGCAGTTCT
ATACGGGACA AATCATCTCC TTTACCGGCG CAGCAGACTG ACTCCCTGAA AAGGGAAATA
GACAACTATC AGGTAAAAGG GCAACCGGGA CTTGATATGA ACGTAGTAGT CGACCGGTTG
CTTGGCATAC TTGATATCGA GGGACCTGAC TGGAAAGGTA TGCCGGTAAG AAATGAACTG
CCGATGGTTG CAATTCTGCC GGGAACGGGA TTTCGCATCG TTTATGGATA CAGCGAAGAC
GGAGTATGGT TGGTTGAAGG ACCTGATGGA AATGACAGGG TGACAAGCAT CCCCGACGGG
TCGCGTTTTC ATGCTCTTCG TCATCGCAGC GCACATGCAC ATGAAGGGGT AAAATTTCTT
GATGTGATAA AAGCGGTATT TGCATCCCGG AAGAATATTT TTCTACGCGC CGGGACCGCA
TCTGTACTCA GTAACGTATT TACGCTTTTT ATATCATTTT ATTCTTTACA GGTATATGAC
AGGGTCATTC CTACGCAGGG TATATCTACA CTTATTGTGC TTACGGTAAC CGTCATCCTG
ATCATGCTTC TCGATCAAAT TGTGAAATTT GCGAGAAATT TTATGATGGA AGGATTTGTA
AAAGATGTCG ACCACGAGAT ATCTCACCGG TTGTTTTTCA GGCTTCTGTC GATCCGTATG
GATCAGTTTC CTCCAAGCGT AGGCTCATTG GCTTCACAGG TTCGCGGCTA TGATTCAATC
AGGATGTTCG CCTCGACTGC GACCCTCTAT ATTCTGTTCG ATGTTCCGTT CGGTATTATC
TATCTGCTTG TTATGGTGGC TATCGCGGGG CCACTGGTTG CACTTGTTGC CAGCGTGTTT
TTTGCGCTGT CGATTATAAC CGGATTGACA TTCCGAAAAA AAATCGAGGA AAACACCGAA
AAGGCCGTAG TTACTTCTAA CAAAAAACTT GGGGTTCTTG TAGATAGCGT TGATGGCGCT
GAAACGATTA AAACCAGCGG GGCATGGTGG CAGATGGTCA ATCTTTGGGA TACACTTAAC
CATCATGTTC TTGAAAACGA AGGGAGGACT CGGTTTTATA CGGATATGTC AAACAATTTT
GCCGGTTTCA TGCAGCAGTT GAGTTATATC CTGATTGTCG CAACCGGAGC ATTTCTTGCT
GCACAAAACA AATTAACAGC AGGTGCAATC ATAGCCTGTT CTATTCTGTC GAGCAGAGTG
CTTGCGCCGA TTGGCATGCT GCCGGGACTG ATTCTTCAAT GGGGTCATGC AAAAGTGGCA
TACAAAAATC TGGAGAACAT CTACTCGCTT GAAACGGATA ATCATGGCAT TGTAAAACCG
CTGATGCCCG ACAGTTTACG TGGAGAGTAC GATGTTCGAA ATATCAGATT TTCCTACAAA
GAGCAGAACG ATGCGGTTGC AATTGATCGT TTGAAGATCT CCGCAGGTGA AAAGATCGGC
TTGCTCGGCG TGGTGGGGTC GGGCAAAAGC ACATTCCTGA AGTTGCTGGC CGGCTTATAC
AAACCGCAAT CCGGTCAAAT CCTTCTGGAT TCGCTCAATT ATCAGCAGGT TTCGAGGCAG
GTTGTATCGA AACATATTGG ATACGTGCAT CAGCATGTGC ACCTGTTTGC TGGAACTCTG
CGGGATAATC TGACGCTTGG TCTGACTTCC GTTACGGATA ATCGTATCCT CGAGGTGAGC
GAAATGACCG GCTTGAATCA GCTGATAGCG AATCATCCGA AAGGACTCGA TCTGCAGATC
GCCGAAGGCG GCTCAGGCGT ATCCGGGGGT CAGCGACAGC TCATTGCCGT AACGAGACTT
TTGCTTGCAC ATCCATCGAT CTGGCTTCTT GACGAACCTA CAGCATCCAT GGATGACAGA
TCGGAAAAAA TGGTCATCTC GGCGTTTGCC AAAACCATAA GGCCCGAAGA TACGATGGTT
CTGGTCACGC ATAAGCCGGT CATGCTCACG CTTGTCGATC GGTTAATTAT CATGAATGCT
TCCGGCATTG TCATGGACGG TCCCCGTGAC GAGGTGTTAA GCAAACTGCA GAATCCTCAA
GTTCAGAATG TCAACACAAA AAAGGCTGTA CCGTCATATG CTTAA
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| Protein sequence | MNQQDPQIYE VKWLIDRCSS IRDKSSPLPA QQTDSLKREI DNYQVKGQPG LDMNVVVDRL
LGILDIEGPD WKGMPVRNEL PMVAILPGTG FRIVYGYSED GVWLVEGPDG NDRVTSIPDG
SRFHALRHRS AHAHEGVKFL DVIKAVFASR KNIFLRAGTA SVLSNVFTLF ISFYSLQVYD
RVIPTQGIST LIVLTVTVIL IMLLDQIVKF ARNFMMEGFV KDVDHEISHR LFFRLLSIRM
DQFPPSVGSL ASQVRGYDSI RMFASTATLY ILFDVPFGII YLLVMVAIAG PLVALVASVF
FALSIITGLT FRKKIEENTE KAVVTSNKKL GVLVDSVDGA ETIKTSGAWW QMVNLWDTLN
HHVLENEGRT RFYTDMSNNF AGFMQQLSYI LIVATGAFLA AQNKLTAGAI IACSILSSRV
LAPIGMLPGL ILQWGHAKVA YKNLENIYSL ETDNHGIVKP LMPDSLRGEY DVRNIRFSYK
EQNDAVAIDR LKISAGEKIG LLGVVGSGKS TFLKLLAGLY KPQSGQILLD SLNYQQVSRQ
VVSKHIGYVH QHVHLFAGTL RDNLTLGLTS VTDNRILEVS EMTGLNQLIA NHPKGLDLQI
AEGGSGVSGG QRQLIAVTRL LLAHPSIWLL DEPTASMDDR SEKMVISAFA KTIRPEDTMV
LVTHKPVMLT LVDRLIIMNA SGIVMDGPRD EVLSKLQNPQ VQNVNTKKAV PSYA
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