Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_2260 |
Symbol | |
ID | 6355283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 2482994 |
End bp | 2486689 |
Gene Length | 3696 bp |
Protein Length | 1231 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642669851 |
Product | hypothetical protein |
Protein accession | YP_001944262 |
Protein GI | 189347733 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGAAAGT CCGACAAACT GCTAGGGAAA AGGTACACGC CTGAGCTAAA TGTAAAACTT GAAATATCTG AAATATTCCA AGGTCTGGGA CGAACCGAAC AGTTTAAAAG GAAGGTAACA AAGCAATTTG ATCAGTTTCT GATAAAAGGG AAAAAGGTAT TAAAGAATCA ACCTGAAGTT AAAGAAAGTC TTGAGAGCTT AGAAAATGCA TTTGATGAAT TACAGAATTT ATTTCACAAT ACTGATTTCT TAGGAACTGC ACCAATTCCG ATAAATGACT TTGAAGACTT ATTGAACAAT ACTCAAAGCT CTGTTCAAGA TATTTATAAC TACTATATAA CGGAAGAACG TAAAGTACAA AAAGAAAAAA ATGACTACCA ATATTATCAT AAACACGGTA CTGAATTAAG AAATATTAGA GAGTTTGAAC ATGAGCTTTC TACTTTTCAA AATTTAATTC ATAGCTCTTC ATTCAAACTT GCGAATAATC CTTTTTTATT ACTAGATGGT GAAGCTGGCA TTGGGAAATC ACATTTGATT GGAGATATAG TTTCAAGGAG AATTAAAAAA GAACATGAAG GCGTTTTTCT TCTGGGGCAG CATTTTGTTA CGGAAGAAGA TCCATGGACA CAAATTTTTA AAAGACTTCA AATCAACTCT AAGTCAGCAG ATTTTCTCAG AAAATTAAAT AAACGAGCGG AAGAGACCGG AAAGAGAATA GTTCTTTTTA TTGATGCGAT CAATGAAGGA AAAGGAAACT ACTTCTGGAA TGAGTTTGTA AAAAGCTTCA TTAATGAGAT AAAGAAATAT GAATGGCTTG GGCTTGTATT CACTATAAGA ACTTCCTACA AAAAATTAAT TTTTCCAGAA GAAGAAAGGT CTAGTCTGGA AATAGTAGAA CATCATCATT ATGGATTTAG GAATATCGAA TATGAAGCAA GCAAATTGTT TTTTGACAAT TACAGCATTG AACTACCTAA TGTACCACTG TTGCACCCGG AATTTCAAAA CCCACTCTTC TTAAAACTAT TTTGTGAGGG AATTAATAAA GCAGGATTAA CCCGTATCCC AGATGGTCTT CAAGGCATAA CTTCAATTAT TAACTTTTTC GTCAAAAACG TCAATATTGT TTTATCGAAA CCAAAAAGAG TTGGGTACTC AGATAGTTTA AACTTAGTAC AAAAATCCAT TAATGCTTTA ATAAAGTGCA AAGTTGACAA TGAACTTAGA TATGTGCTAT ATGAACAGGC TTATGAAGTT GTCAATGAAT CTATTTCAAG TTTTATCGAC AAAAAAGGAT TTATAGATGA ATTAATTACA GAGGGTGTAC TATCAAAAAA CCTCTTTTGG AAAGGAGCGG ATGATTATGA AGAGGGAGTT TATTTAGCCT ACGAGCGATT TGAAGACCAT TTAACTGTTC AATACTTGCT TGAACAATAT CCTGAATTAG AGAAAGATTT CAAAGAAAAT GGCAAACTCT ACAAATATGT AGAAAATGAA AACGCAGTTT ATAGGTATAA AGGACTAATT GAGGCTTTTT CAATTCAGAT TCCTGAAATC AAAGGTTATG AGTTTTATAG CCTTATTCCT GACCTAAGGG ATAAATATCC AATTGTTGAG TCTTTTGTTG AAAGTTTACT ATGGAGAAAG GTAGATACCA TTAATGAAGA GTCAAAGAAA TATGTAAATG AACATGTATT ATCCTACCAA GGTACACATG ATTATTTCTG GGAAACTATT CTTGCGGTTA CAGCAATACC AAACCATTTC TTCAATGCCC ACTCTTTACA TAATCATTTA CTCAGGTTCT CACTTGCTGA CCGAGATGCA AATTGGACTC AATTGCTTAA ATACAAATAT GATAATGAAT CATCAGTAAA ACGGCTTATT GATTGGGCAT GGAATGAAAC AGACAAATCG CACATCTCGG ATGAATCAGT TTTACTTTCG AGCATTACCT TGTCATGGTT TCATACTTCT ACAAACAGAG AACTTCGAGA CTGTTCCACA AAAGCAATGA TTTGCTTGCT TCAAGACAGA GTTCATGTAC TTATTGAACT CCTTCAAAAG TTTGAAACGG TAAATGACCC TTACGTTTAT GATCGTTTGT TTGCAGTTGC TTACGGTTGT GCAGTGAGAA CAAATAAGAA AGAGGAATTA GCAGCCCTAA GTGATTATAT ATACGTAACC ATATTTAAGG ATAAAGATGA AGTTTATCCG CATGTTCTAC TCCGTGATTA TGCAAGAGGA GTAATTGAGT TTACAAGATT CTCGGGTACT GAATTACCTT TTGATATTGA AGATGTAAGA CCTCCATACA AAAGTTCATT TCCTCACAAA ATTATGACCA ATAAGGAAAT CGATAAAAAA TACAAATTCG ATTATGACGC CAAGGATTTC AAAAAACATT ATTGGTCTCA GAATTCGATT CTTAGTTCAA TGACAACCGA ATACGGTCGA GGTACTGGTG GATACGGAGA TTTTGGAAGA TACACTTTTG AAAGTGCTTT AAGGTCATGG GATGTTAATA CAAACCAGCT TAGTAATCTT GCTATTGAGT GGATTTTTGA AAAATATGGT TATGACGTAG AAAAACATGG AGAATACGAC AGAAACACTA ATTCATATGA CAGGCGAGCT TCTACAATTG AAAGAATTGG CAAAAAGTAC CAGTGGATTG CTCTTTACGA AATGGTAGCG CGAGTTTCGG ACAATTTCAA GAAATATGAA AGATGGAGTT TTGAAAAGGA AAAAGAAGTG CCATACCAAG GTCCTTGGGA CCCTTACATA AGAGATATTG ATCCAACATT GCTTATTAGT GAAACAGGAA GTTATGATGA AGACGATCTT CGAGATTTCT GGTGGGTTAA CAACAAAATA TTTAATTGGG ACTGTACAAA CGAAAGCTGG GTAAATGATT CAAATGTATT GCCTAAAATG GAAGAAATTA TCCAGGTTAA AGATGATCTG GGAGAAGAAT GGTTGGTATT GGAGGGATAC CCGTCTTGGT CAGAATCGAA AAAAATTGGT GAAGAAAAAT GGGATCAACC ACATAAAGAG CTTTGGTGTC ACATTAGAAG TTATCTAGTT AAAAATGATG AATACGACTC ATTTAAAGAT TGGGCTATCG AACAGGAATT CATGGGGCGT TGGATGCCTG AAAGTGGTGA CAGATACGAA ATGTTCAGCA GAGAATATTA TTGGTCACCT GCTCAGGAAT ATTTTATGTC TGAATTTTAT GGAGGCACTG AATGGACAGA AGTTCATGAC AGGAAATCAG GGGAGTATGT AGCAGAAGTC AATGTAACTG CACATGGTTT TTTATGGGAG GAAGAGTTTG ATAAATCAAA AGATGAAACT ATTAGCTTTT TAAAACCAAG TACTGTTATT CATAAGGGTA TGGATTTAAA GTACAGCCAA AGAGAGGGAG AATTTATAGA CAATTCAGAA GTAGTTCAAT GTTTTGCAAC AAATGTTTAT AATGATTCAA AATCTTATCT ACTTGTTCGG AAAGGTTCTT TTTTGAAGTT TCTAAATGAG AACAAATTAA AGGTTGTTTG GACGATACTA GGAGAAAAGC AAATAATTGG AGGACGATCA TTTGGAGCTA ATTATTTAGG AAGATTGGAA ATAAGTGGTG CTTATTATTT AGATAATTCA AACTTAGTTG GAACATTGAG AACAAAACAT AATTAA
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Protein sequence | MGKSDKLLGK RYTPELNVKL EISEIFQGLG RTEQFKRKVT KQFDQFLIKG KKVLKNQPEV KESLESLENA FDELQNLFHN TDFLGTAPIP INDFEDLLNN TQSSVQDIYN YYITEERKVQ KEKNDYQYYH KHGTELRNIR EFEHELSTFQ NLIHSSSFKL ANNPFLLLDG EAGIGKSHLI GDIVSRRIKK EHEGVFLLGQ HFVTEEDPWT QIFKRLQINS KSADFLRKLN KRAEETGKRI VLFIDAINEG KGNYFWNEFV KSFINEIKKY EWLGLVFTIR TSYKKLIFPE EERSSLEIVE HHHYGFRNIE YEASKLFFDN YSIELPNVPL LHPEFQNPLF LKLFCEGINK AGLTRIPDGL QGITSIINFF VKNVNIVLSK PKRVGYSDSL NLVQKSINAL IKCKVDNELR YVLYEQAYEV VNESISSFID KKGFIDELIT EGVLSKNLFW KGADDYEEGV YLAYERFEDH LTVQYLLEQY PELEKDFKEN GKLYKYVENE NAVYRYKGLI EAFSIQIPEI KGYEFYSLIP DLRDKYPIVE SFVESLLWRK VDTINEESKK YVNEHVLSYQ GTHDYFWETI LAVTAIPNHF FNAHSLHNHL LRFSLADRDA NWTQLLKYKY DNESSVKRLI DWAWNETDKS HISDESVLLS SITLSWFHTS TNRELRDCST KAMICLLQDR VHVLIELLQK FETVNDPYVY DRLFAVAYGC AVRTNKKEEL AALSDYIYVT IFKDKDEVYP HVLLRDYARG VIEFTRFSGT ELPFDIEDVR PPYKSSFPHK IMTNKEIDKK YKFDYDAKDF KKHYWSQNSI LSSMTTEYGR GTGGYGDFGR YTFESALRSW DVNTNQLSNL AIEWIFEKYG YDVEKHGEYD RNTNSYDRRA STIERIGKKY QWIALYEMVA RVSDNFKKYE RWSFEKEKEV PYQGPWDPYI RDIDPTLLIS ETGSYDEDDL RDFWWVNNKI FNWDCTNESW VNDSNVLPKM EEIIQVKDDL GEEWLVLEGY PSWSESKKIG EEKWDQPHKE LWCHIRSYLV KNDEYDSFKD WAIEQEFMGR WMPESGDRYE MFSREYYWSP AQEYFMSEFY GGTEWTEVHD RKSGEYVAEV NVTAHGFLWE EEFDKSKDET ISFLKPSTVI HKGMDLKYSQ REGEFIDNSE VVQCFATNVY NDSKSYLLVR KGSFLKFLNE NKLKVVWTIL GEKQIIGGRS FGANYLGRLE ISGAYYLDNS NLVGTLRTKH N
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