Gene Clim_2260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_2260 
Symbol 
ID6355283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2482994 
End bp2486689 
Gene Length3696 bp 
Protein Length1231 aa 
Translation table11 
GC content34% 
IMG OID642669851 
Producthypothetical protein 
Protein accessionYP_001944262 
Protein GI189347733 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGAAAGT CCGACAAACT GCTAGGGAAA AGGTACACGC CTGAGCTAAA TGTAAAACTT 
GAAATATCTG AAATATTCCA AGGTCTGGGA CGAACCGAAC AGTTTAAAAG GAAGGTAACA
AAGCAATTTG ATCAGTTTCT GATAAAAGGG AAAAAGGTAT TAAAGAATCA ACCTGAAGTT
AAAGAAAGTC TTGAGAGCTT AGAAAATGCA TTTGATGAAT TACAGAATTT ATTTCACAAT
ACTGATTTCT TAGGAACTGC ACCAATTCCG ATAAATGACT TTGAAGACTT ATTGAACAAT
ACTCAAAGCT CTGTTCAAGA TATTTATAAC TACTATATAA CGGAAGAACG TAAAGTACAA
AAAGAAAAAA ATGACTACCA ATATTATCAT AAACACGGTA CTGAATTAAG AAATATTAGA
GAGTTTGAAC ATGAGCTTTC TACTTTTCAA AATTTAATTC ATAGCTCTTC ATTCAAACTT
GCGAATAATC CTTTTTTATT ACTAGATGGT GAAGCTGGCA TTGGGAAATC ACATTTGATT
GGAGATATAG TTTCAAGGAG AATTAAAAAA GAACATGAAG GCGTTTTTCT TCTGGGGCAG
CATTTTGTTA CGGAAGAAGA TCCATGGACA CAAATTTTTA AAAGACTTCA AATCAACTCT
AAGTCAGCAG ATTTTCTCAG AAAATTAAAT AAACGAGCGG AAGAGACCGG AAAGAGAATA
GTTCTTTTTA TTGATGCGAT CAATGAAGGA AAAGGAAACT ACTTCTGGAA TGAGTTTGTA
AAAAGCTTCA TTAATGAGAT AAAGAAATAT GAATGGCTTG GGCTTGTATT CACTATAAGA
ACTTCCTACA AAAAATTAAT TTTTCCAGAA GAAGAAAGGT CTAGTCTGGA AATAGTAGAA
CATCATCATT ATGGATTTAG GAATATCGAA TATGAAGCAA GCAAATTGTT TTTTGACAAT
TACAGCATTG AACTACCTAA TGTACCACTG TTGCACCCGG AATTTCAAAA CCCACTCTTC
TTAAAACTAT TTTGTGAGGG AATTAATAAA GCAGGATTAA CCCGTATCCC AGATGGTCTT
CAAGGCATAA CTTCAATTAT TAACTTTTTC GTCAAAAACG TCAATATTGT TTTATCGAAA
CCAAAAAGAG TTGGGTACTC AGATAGTTTA AACTTAGTAC AAAAATCCAT TAATGCTTTA
ATAAAGTGCA AAGTTGACAA TGAACTTAGA TATGTGCTAT ATGAACAGGC TTATGAAGTT
GTCAATGAAT CTATTTCAAG TTTTATCGAC AAAAAAGGAT TTATAGATGA ATTAATTACA
GAGGGTGTAC TATCAAAAAA CCTCTTTTGG AAAGGAGCGG ATGATTATGA AGAGGGAGTT
TATTTAGCCT ACGAGCGATT TGAAGACCAT TTAACTGTTC AATACTTGCT TGAACAATAT
CCTGAATTAG AGAAAGATTT CAAAGAAAAT GGCAAACTCT ACAAATATGT AGAAAATGAA
AACGCAGTTT ATAGGTATAA AGGACTAATT GAGGCTTTTT CAATTCAGAT TCCTGAAATC
AAAGGTTATG AGTTTTATAG CCTTATTCCT GACCTAAGGG ATAAATATCC AATTGTTGAG
TCTTTTGTTG AAAGTTTACT ATGGAGAAAG GTAGATACCA TTAATGAAGA GTCAAAGAAA
TATGTAAATG AACATGTATT ATCCTACCAA GGTACACATG ATTATTTCTG GGAAACTATT
CTTGCGGTTA CAGCAATACC AAACCATTTC TTCAATGCCC ACTCTTTACA TAATCATTTA
CTCAGGTTCT CACTTGCTGA CCGAGATGCA AATTGGACTC AATTGCTTAA ATACAAATAT
GATAATGAAT CATCAGTAAA ACGGCTTATT GATTGGGCAT GGAATGAAAC AGACAAATCG
CACATCTCGG ATGAATCAGT TTTACTTTCG AGCATTACCT TGTCATGGTT TCATACTTCT
ACAAACAGAG AACTTCGAGA CTGTTCCACA AAAGCAATGA TTTGCTTGCT TCAAGACAGA
GTTCATGTAC TTATTGAACT CCTTCAAAAG TTTGAAACGG TAAATGACCC TTACGTTTAT
GATCGTTTGT TTGCAGTTGC TTACGGTTGT GCAGTGAGAA CAAATAAGAA AGAGGAATTA
GCAGCCCTAA GTGATTATAT ATACGTAACC ATATTTAAGG ATAAAGATGA AGTTTATCCG
CATGTTCTAC TCCGTGATTA TGCAAGAGGA GTAATTGAGT TTACAAGATT CTCGGGTACT
GAATTACCTT TTGATATTGA AGATGTAAGA CCTCCATACA AAAGTTCATT TCCTCACAAA
ATTATGACCA ATAAGGAAAT CGATAAAAAA TACAAATTCG ATTATGACGC CAAGGATTTC
AAAAAACATT ATTGGTCTCA GAATTCGATT CTTAGTTCAA TGACAACCGA ATACGGTCGA
GGTACTGGTG GATACGGAGA TTTTGGAAGA TACACTTTTG AAAGTGCTTT AAGGTCATGG
GATGTTAATA CAAACCAGCT TAGTAATCTT GCTATTGAGT GGATTTTTGA AAAATATGGT
TATGACGTAG AAAAACATGG AGAATACGAC AGAAACACTA ATTCATATGA CAGGCGAGCT
TCTACAATTG AAAGAATTGG CAAAAAGTAC CAGTGGATTG CTCTTTACGA AATGGTAGCG
CGAGTTTCGG ACAATTTCAA GAAATATGAA AGATGGAGTT TTGAAAAGGA AAAAGAAGTG
CCATACCAAG GTCCTTGGGA CCCTTACATA AGAGATATTG ATCCAACATT GCTTATTAGT
GAAACAGGAA GTTATGATGA AGACGATCTT CGAGATTTCT GGTGGGTTAA CAACAAAATA
TTTAATTGGG ACTGTACAAA CGAAAGCTGG GTAAATGATT CAAATGTATT GCCTAAAATG
GAAGAAATTA TCCAGGTTAA AGATGATCTG GGAGAAGAAT GGTTGGTATT GGAGGGATAC
CCGTCTTGGT CAGAATCGAA AAAAATTGGT GAAGAAAAAT GGGATCAACC ACATAAAGAG
CTTTGGTGTC ACATTAGAAG TTATCTAGTT AAAAATGATG AATACGACTC ATTTAAAGAT
TGGGCTATCG AACAGGAATT CATGGGGCGT TGGATGCCTG AAAGTGGTGA CAGATACGAA
ATGTTCAGCA GAGAATATTA TTGGTCACCT GCTCAGGAAT ATTTTATGTC TGAATTTTAT
GGAGGCACTG AATGGACAGA AGTTCATGAC AGGAAATCAG GGGAGTATGT AGCAGAAGTC
AATGTAACTG CACATGGTTT TTTATGGGAG GAAGAGTTTG ATAAATCAAA AGATGAAACT
ATTAGCTTTT TAAAACCAAG TACTGTTATT CATAAGGGTA TGGATTTAAA GTACAGCCAA
AGAGAGGGAG AATTTATAGA CAATTCAGAA GTAGTTCAAT GTTTTGCAAC AAATGTTTAT
AATGATTCAA AATCTTATCT ACTTGTTCGG AAAGGTTCTT TTTTGAAGTT TCTAAATGAG
AACAAATTAA AGGTTGTTTG GACGATACTA GGAGAAAAGC AAATAATTGG AGGACGATCA
TTTGGAGCTA ATTATTTAGG AAGATTGGAA ATAAGTGGTG CTTATTATTT AGATAATTCA
AACTTAGTTG GAACATTGAG AACAAAACAT AATTAA
 
Protein sequence
MGKSDKLLGK RYTPELNVKL EISEIFQGLG RTEQFKRKVT KQFDQFLIKG KKVLKNQPEV 
KESLESLENA FDELQNLFHN TDFLGTAPIP INDFEDLLNN TQSSVQDIYN YYITEERKVQ
KEKNDYQYYH KHGTELRNIR EFEHELSTFQ NLIHSSSFKL ANNPFLLLDG EAGIGKSHLI
GDIVSRRIKK EHEGVFLLGQ HFVTEEDPWT QIFKRLQINS KSADFLRKLN KRAEETGKRI
VLFIDAINEG KGNYFWNEFV KSFINEIKKY EWLGLVFTIR TSYKKLIFPE EERSSLEIVE
HHHYGFRNIE YEASKLFFDN YSIELPNVPL LHPEFQNPLF LKLFCEGINK AGLTRIPDGL
QGITSIINFF VKNVNIVLSK PKRVGYSDSL NLVQKSINAL IKCKVDNELR YVLYEQAYEV
VNESISSFID KKGFIDELIT EGVLSKNLFW KGADDYEEGV YLAYERFEDH LTVQYLLEQY
PELEKDFKEN GKLYKYVENE NAVYRYKGLI EAFSIQIPEI KGYEFYSLIP DLRDKYPIVE
SFVESLLWRK VDTINEESKK YVNEHVLSYQ GTHDYFWETI LAVTAIPNHF FNAHSLHNHL
LRFSLADRDA NWTQLLKYKY DNESSVKRLI DWAWNETDKS HISDESVLLS SITLSWFHTS
TNRELRDCST KAMICLLQDR VHVLIELLQK FETVNDPYVY DRLFAVAYGC AVRTNKKEEL
AALSDYIYVT IFKDKDEVYP HVLLRDYARG VIEFTRFSGT ELPFDIEDVR PPYKSSFPHK
IMTNKEIDKK YKFDYDAKDF KKHYWSQNSI LSSMTTEYGR GTGGYGDFGR YTFESALRSW
DVNTNQLSNL AIEWIFEKYG YDVEKHGEYD RNTNSYDRRA STIERIGKKY QWIALYEMVA
RVSDNFKKYE RWSFEKEKEV PYQGPWDPYI RDIDPTLLIS ETGSYDEDDL RDFWWVNNKI
FNWDCTNESW VNDSNVLPKM EEIIQVKDDL GEEWLVLEGY PSWSESKKIG EEKWDQPHKE
LWCHIRSYLV KNDEYDSFKD WAIEQEFMGR WMPESGDRYE MFSREYYWSP AQEYFMSEFY
GGTEWTEVHD RKSGEYVAEV NVTAHGFLWE EEFDKSKDET ISFLKPSTVI HKGMDLKYSQ
REGEFIDNSE VVQCFATNVY NDSKSYLLVR KGSFLKFLNE NKLKVVWTIL GEKQIIGGRS
FGANYLGRLE ISGAYYLDNS NLVGTLRTKH N