Gene Clim_2234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_2234 
SymbolrpsL 
ID6355257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2461415 
End bp2461822 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content55% 
IMG OID642669826 
Product30S ribosomal protein S12 
Protein accessionYP_001944237 
Protein GI189347708 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0048] Ribosomal protein S12 
TIGRFAM ID[TIGR00981] ribosomal protein S12, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000995166 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGACGA TCCAGCAGCT TATCAGGAGC GGAAGAAGTA TAAAGGCGTC AAAGACAGCG 
TCCCCAGCGC TGGAGAAGTG CCCGCAGAAG CGCGGTGTTT GTACCCGCGT TTATACAACA
ACCCCGAAAA AGCCTAACTC CGCGTTACGG AAGGTTGCGC GCGTAAGACT TTCAAATAAA
ATAGAGGTCA CGGCTTACAT TCCGGGTGAA GGTCATAACC TGCAGGAGCA CTCCATTGTT
CTGATTCGCG GCGGCAGGGT AAAGGATCTT CCTGGTGTGC GTTATCATAT TGTGAGGGGT
TCGCTGGATA CGTCCGGCGT GGCTGATCGC AAACAGAGTC GCTCCAAGTA TGGTGCCAAG
CAGCCTAAGG CGGGCGCGGC AGCTCCGGCT AAGGGTAAGG GCAGATAA
 
Protein sequence
MPTIQQLIRS GRSIKASKTA SPALEKCPQK RGVCTRVYTT TPKKPNSALR KVARVRLSNK 
IEVTAYIPGE GHNLQEHSIV LIRGGRVKDL PGVRYHIVRG SLDTSGVADR KQSRSKYGAK
QPKAGAAAPA KGKGR