Gene Clim_2231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_2231 
Symbol 
ID6355254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2457514 
End bp2458695 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content52% 
IMG OID642669823 
Productelongation factor Tu 
Protein accessionYP_001944234 
Protein GI189347705 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000169519 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAG AGTCCTACAA AAGGGATAAA CCTCATGTCA ATATCGGTAC CATTGGCCAC 
GTTGACCATG GTAAAACAAC CCTGACCGCA GCAATCACTT CGGTTCTTGC AAAACAGGGT
CTTGCCCTTC AGCGTGATTT CGGCAGCATC GACAAGGCTC CGGAAGAGAG AGAGCGCGGT
ATTACCATTT CTACCGCACA CGTCGAGTAC CAGACCAAAA AGCGCCATTA CGCGCACATC
GACTGTCCCG GTCATGCTGA CTACATCAAG AATATGATTA CCGGTGCAGC CCAGATGGAC
GGAGCTATTC TTGTTGTTGC AGGTACCGAC GGTCCTATGC CCCAGACCCG CGAGCACATT
CTGCTTGCCC GTCAGGTGAA CGTTCCGGCT CTTGTGGTAT TTCTCAACAA GGTCGATATT
GCCGATCCCG AGCTTCTCGA GCTTGTTGAA CTTGAGCTGA GAGAGCTTCT GACCGAGTAC
AACTTCCCTG GTGACGATAT TCCTATTATC AAAGGTTCCG CTCTGAAAGC ACTCGATGGC
GATCCGGAAG GCGAAAAAGC CATTATGGAG CTTATGGACG CTGTCGATGA GTTCATTCCT
GAGCCGGTTC GCGACGTTGA CAAGCCGTTT CTTATGCCGG TTGAAGATGT TTTCTCGATT
TCAGGCCGTG GTACCGTCGG TACCGGCAGA ATCGAAAGAG GCCGTATCAA GATCAACGAA
GAGGTCGAAA TCGTCGGTAT CAAGCCTACC CGCAAGTCGG TAGTCACCGG TATCGAAATG
TTCCAGAAGC TTCTTGACGA AGGTCAGGCC GGTGATAACG CAGGTCTTCT TCTCAGAGGT
GTAGACAAGA CCGAACTCGA GCGTGGCATG GTTATCGCCA AGCCCGGCAG CATCAAGCCG
CACACCAAGT TCAAGGCTGA AGTCTATATT CTGAGGAAAG AGGAAGGCGG CCGTCACACC
CCGTTCTTCA ACGGCTACCG TCCGCAGTTC TATTTCAGAA CCACTGACGT TACCGGTTCG
GTAACCCTTC CCGAAGGTGT TGAAATGGTC ATGCCCGGAG ACAACCTCTC CGTTGAAGTC
GAGCTGATCG TTCCTATCGC TATGGACGAA GGCCTTCGTT TCGCTATCCG CGAGGGCGGT
CGTACTGTCG GTGCTGGTTC TGTAACCAAG ATCATCGAGT AA
 
Protein sequence
MAKESYKRDK PHVNIGTIGH VDHGKTTLTA AITSVLAKQG LALQRDFGSI DKAPEERERG 
ITISTAHVEY QTKKRHYAHI DCPGHADYIK NMITGAAQMD GAILVVAGTD GPMPQTREHI
LLARQVNVPA LVVFLNKVDI ADPELLELVE LELRELLTEY NFPGDDIPII KGSALKALDG
DPEGEKAIME LMDAVDEFIP EPVRDVDKPF LMPVEDVFSI SGRGTVGTGR IERGRIKINE
EVEIVGIKPT RKSVVTGIEM FQKLLDEGQA GDNAGLLLRG VDKTELERGM VIAKPGSIKP
HTKFKAEVYI LRKEEGGRHT PFFNGYRPQF YFRTTDVTGS VTLPEGVEMV MPGDNLSVEV
ELIVPIAMDE GLRFAIREGG RTVGAGSVTK IIE