| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_2222 |
|---|
| Symbol | rplP |
|---|
| ID | 6355245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 2452655 |
|---|
| End bp | 2453074 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642669814 |
|---|
| Product | 50S ribosomal protein L16 |
|---|
| Protein accession | YP_001944225 |
|---|
| Protein GI | 189347696 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0197] Ribosomal protein L16/L10E |
|---|
| TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000000157972 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAATGC CAAAGAGAGT TAAATACAGA AAGTCACAGA GAGGCCGGAT GAAAGGCAAT
TCCGGTCGCG GAACTTCTGT TTCTTTTGGT TCTTTCGGTC TGAAAGCAAT GGAGCCAGCC
TGGATAACCA GTCGCCAGAT CGAGGCAGCT CGTGTTGCCA TGAACAGATA TATGAAAAGA
GATGGCAAGA TCTGGATCAG AATATTTCCC GACAAACCAG TATCGAAAAA AGCGGCTGAA
ACCCGAATGG GTTCAGGTAA AGGTTCGCCG GAATTCTGGG TAGCCGTTGT CAAACCCGGA
CGAATAATGT TCGAAGCTGA GGGTGTTTCA CGTGAGGTTG CAACTGAAGC TTTCAGGCTT
GCAGCGCAGA AACTGCCGAT TAAAACAAAG TTTATTGTCC GTCCTGATTA CGAAGGATAA
|
|---|
| Protein sequence | MLMPKRVKYR KSQRGRMKGN SGRGTSVSFG SFGLKAMEPA WITSRQIEAA RVAMNRYMKR
DGKIWIRIFP DKPVSKKAAE TRMGSGKGSP EFWVAVVKPG RIMFEAEGVS REVATEAFRL
AAQKLPIKTK FIVRPDYEG
|
|---|
| |