Gene Clim_2193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_2193 
Symbol 
ID6355987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2433064 
End bp2434671 
Gene Length1608 bp 
Protein Length535 aa 
Translation table11 
GC content56% 
IMG OID642669784 
Productlight-independent protochlorophyllide reductase subunit B 
Protein accessionYP_001944196 
Protein GI189347667 
COG category[C] Energy production and conversion 
COG ID[COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains 
TIGRFAM ID[TIGR01278] light-independent protochlorophyllide reductase, B subunit 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTTAG CTTTCTGGCT CTATGAAGGC ACCGCTCTTC ATGGTATAAG CCGAATCACC 
AACAGCATGA AAGGGGTTCA CACCGTCTAT CATGCCCCGC AGGGCGACGA TTACATTACG
GCGACCTACA GCATGCTTGA ACGAACTCCC GATTTTCCCG GCCTCTCCAT CAGCGTGGTT
CGGGGCAGAG ACCTTGCACA GGGCGTATCG AGACTTCCCG GAACCCTCCA GCAGGTGGCG
CACCACTACA GCCCGGATCT TACCGTTATC GCTCCGAGCT GCAGTACGGC CCTGCTCCAG
GAGGACCTTC ATCAGCTTGC TGCCCATTCC GGAGTTCCGG AGGAGAAGCT TCTGGTCTAT
GCGCTCAATC CCTTCAGAGT CTCGGAAAAC GAGGCTGCTG ACGGTCTTTT CTTCGAACTG
GTGAAGCGGT TTGCCGTCGC ACAGGAAAAA ACGCCCCGGC CTTCGGTCAA TCTTCTCGGC
TTTACCTCGC TCGGGTTTCA TCTTCGCGCC AATCTTACAA GCCTGCGGCG CATGTTGCAG
ACGCTCGGTG TTTCCGTCAA TGTTGTCGCA CCCTGGGGCG CAGGTATCGA GGATCTCCGC
AAGCTGCCTG CAGCCTGGCT CAATATCGCT CCCTACCGGG AGATTGGCGA AACGGCTGCA
GGGTACCTCG GTGAAACGTT CGGCATGCCG GCAATCCATG AAGCTCCTAT AGGCGTGGAG
CCCACCCTTG CATGGCTCCG TTCCGTCATT GAAAAAATCA ACGCCGTCGG TGTCGAACAG
GGCGTTCCCC CTATCGGCAT GCCGAAACTC AACGCCTTTT CGCTTGACGG CATGAGCGCG
CCAAGCGGCG TTCCCTGGTT TGCCAGAACG GCCGATATGG AAAGTTTCAG CAACAAACGG
GCCTTTGTTT TCGGCGATGC CACCCATACG GTCAGCATCG TGAAGTTTCT GCGAGATGAA
CTCGGCATGA AAATCATCGG AGCCGGAACC TACATGCACC GCCATGCCGA TTTTGTCCGC
AGGGAGCTCG AGGGATACCT TTCCGGCGAA CTTCTGGTTA CCGACAAGTT TCAGGACGTT
TCGAAAGTCA TTGAAGATGA AATGCCCGAT CTGGTATGCG GGACCCAGAT GGAGCGCCAC
AGCTGCCGTA AGCTCGATGT GCCCTGCATG GTGATCTGTC CTCCTACCCA TATCGAAAAC
CATCTGCTCG GCTACTATCC CTTTTTCGGC TTTGACGGAG CCGATGTCAT TGCCGACAGG
GTTTACCTTT CATGCAAGCT TGGTCTTGAA AAGCATCTTA TCGACTTTTT TGGCGATGCA
GGTCTTGAAT ACGAGGATGA AGCATCCCCG TCCGAAAGTG CGCCGCACGC TTCGAACGGG
CATGAAGACG TTGCAGGCGG AAGTACCGCA CAGTCGGTTC CGTCGCACGC CGCAACGGAA
GGGGACGGCA TGAGCTGGAC AGACGAGGCC GAGAACATGC TGAAAAAGGT TCCGTTCTTC
GTGCGCAAAA AGGTGAGAAA GAACACCGAA AACTTTGCCC GCGAGCAGGG CGAAACCACG
GTTACGGCGG ATGTTTTCAG GCAGGCGAAA GAGTCGCTTG GCGGATAA
 
Protein sequence
MRLAFWLYEG TALHGISRIT NSMKGVHTVY HAPQGDDYIT ATYSMLERTP DFPGLSISVV 
RGRDLAQGVS RLPGTLQQVA HHYSPDLTVI APSCSTALLQ EDLHQLAAHS GVPEEKLLVY
ALNPFRVSEN EAADGLFFEL VKRFAVAQEK TPRPSVNLLG FTSLGFHLRA NLTSLRRMLQ
TLGVSVNVVA PWGAGIEDLR KLPAAWLNIA PYREIGETAA GYLGETFGMP AIHEAPIGVE
PTLAWLRSVI EKINAVGVEQ GVPPIGMPKL NAFSLDGMSA PSGVPWFART ADMESFSNKR
AFVFGDATHT VSIVKFLRDE LGMKIIGAGT YMHRHADFVR RELEGYLSGE LLVTDKFQDV
SKVIEDEMPD LVCGTQMERH SCRKLDVPCM VICPPTHIEN HLLGYYPFFG FDGADVIADR
VYLSCKLGLE KHLIDFFGDA GLEYEDEASP SESAPHASNG HEDVAGGSTA QSVPSHAATE
GDGMSWTDEA ENMLKKVPFF VRKKVRKNTE NFAREQGETT VTADVFRQAK ESLGG