| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_2187 |
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| Symbol | |
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| ID | 6355981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 2427008 |
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| End bp | 2428180 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642669778 |
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| Product | oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | YP_001944190 |
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| Protein GI | 189347661 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000177967 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCTGAAG CCTGTCCGGA AAAGGCGTGC GGGCGGGACA ATGAGGAACC GCTCAGTCTC
TACGTTCATG TTCCGTTCTG CCGCAGAAGG TGCAGCTACT GTGATTTTTT TCTTGTTACC
CGACTCGATC ACATCGACGC TTTTTTTAAA GCGCTTGCCG TTGAAACGCT TGCTGCCGCG
CCGCTGTTGC GGGGCCGCAG AGTCAAGTCC GTACATTTCG GCGGCGGGAC TCCCTCGCTT
GTGCCGGTGC GGCTGCTCGC CGGGTGGCTT GATCTTGCCG CATCACTCTG CACGTTTACT
TCCGATGTGG AAATTGCGCT TGAAGCCAAT CCCGAGGATT TTGGCGGGAA TTTCATGGCG
GAGCTGCAAG CCGCAGGAAT CAACCGTCTC AGTCTTGGAG TGCAGTCATT TCTGTCTCGT
AAGCTCTCCG CCCTTGGACG ATTGCATACC GCAGGGGAGG CTTCTGTGAT AACCGCAGAG
GCGCTGAACC GGTTTGCCGC CGTCAGTGTC GATCTTATCT GCGGGGTGCC CGGAGAAACC
CTTCCGGAGT GGTCGAGTGA TCTTCAGGCG GCGCTCTCTC TGGCCGTACC GCATATTTCG
GTGTATATGC TTTCCGTTGA ACCAAAAACG CTTCTGCAGC GCAGCATTGC CAAAGGGCGG
GTGCGGGTGC CTGACGAAAC CGTTCAGGCG TTGATGTATG CAGCGGCAAT CGACGTGCTG
GGCGGCAGCG GGTACCGGCA CTACGAGGTA TCCAATTTTG CGCTTTCCGG CCATGACTCA
CGCTACAATC TTGCCTGCTG GATGCGGGAG CCCTATCTCG GATTCGGTCC TTCGGCCCAC
AGTTTCATGC GTAACGATGG GTCCGAGAGA CGTTGGGCGA ATGCCGGAAC GCTTTTGCGC
TACCTCGACA ACCCGCAGGA GTGCGTGGCT TTCGAGGAGA TTCTTTCAGA AGAAGATCGA
TTCGTCGAAC AAGTTTTTTT GACGTTGCGC ATAAACCGCG GTCTTGATGT TGAGTTTTTG
CGAAAACACA ATAAATTAGG GCTGAACCTT TCAACGGCTG CAGAGGAGTT TCTTGCCAGA
GGATGGATTG TGATTGAAAA CGGTCAGATA TTTCTGACCG GAAAAGGGTT TCTGTTTGCC
GATCATATTG CCGGAGAGTT TATTTCCGGG TAA
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| Protein sequence | MSEACPEKAC GRDNEEPLSL YVHVPFCRRR CSYCDFFLVT RLDHIDAFFK ALAVETLAAA
PLLRGRRVKS VHFGGGTPSL VPVRLLAGWL DLAASLCTFT SDVEIALEAN PEDFGGNFMA
ELQAAGINRL SLGVQSFLSR KLSALGRLHT AGEASVITAE ALNRFAAVSV DLICGVPGET
LPEWSSDLQA ALSLAVPHIS VYMLSVEPKT LLQRSIAKGR VRVPDETVQA LMYAAAIDVL
GGSGYRHYEV SNFALSGHDS RYNLACWMRE PYLGFGPSAH SFMRNDGSER RWANAGTLLR
YLDNPQECVA FEEILSEEDR FVEQVFLTLR INRGLDVEFL RKHNKLGLNL STAAEEFLAR
GWIVIENGQI FLTGKGFLFA DHIAGEFISG
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