Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_2186 |
Symbol | |
ID | 6355980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 2424323 |
End bp | 2426971 |
Gene Length | 2649 bp |
Protein Length | 882 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642669777 |
Product | hypothetical protein |
Protein accession | YP_001944189 |
Protein GI | 189347660 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000183684 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACACC GGGCACTTAA CCGTCTGCTT GCAGTTGCGC TTTTTGCTGC AGTGGAACTG CTCTATCTCA GAACCATGGC CCCTACGCTG TCATTTTGGG ATTGCGGAGA ATTCATCGCT ACTGCCTATA CGCTCGGCGT TCCTCATCCA CCGGGGGCTC CGCTTTTTCT GCTTCTTGGC CGCGTTTTTT CGATGATTCC TTTATTCAGC GATATCGGAG CGAGGGTAAA CCTCATCAGT ACTCTTGCAA GTTCGGCTAC GGTTATGCTT ACCTATCTCA TAGCGTTGCG GTTCATCATC ATGTATCGTA AAAGCGATCC TGAAAGCTGG AGCCCGGGCG ACAGGGTTTC AGCCTGCGGC AGTGCCCTGG TAGCAGCATT GGCCCTGGCG TTTTCGGACA GTTTCTGGTT CAATGCCGTT GAAACGGAAG TGTATGCTCT TTCGTCGTTT TTTACGGCCA TGGTGTTATG GCTGATGCTT CGCTGGCATG AAGACTATCC GAACCCCGGT CATGAGCGAT GGCTGATGCT GATGATGTAT ATGGTCGGAC TCTCCATCGG CGTGCATCTC CTGAGTCTGC TTGCGGTTTT TGCGGCCGCC ATGATCTATT ATTTCCGGAA GTACGAAGTT ACCCTGAAAT CGTTTGCCAT GCTTGTCGCG GCGTCTTCGG CGCTCTTTGT GCTGATCTAC CAGGTGATTA TCAAGGGTCT TCCCGTTCTG TTTCAGTTCG CTTCATGGTG GGGGTTTCTG CTTCTGCTTT TCCTTCTTGC TTATGGGGTC TGGTACACGC ACAAGGAACG GTTTGCAATG CTCAACACCC TGCTCGTTTC TCTGTTTCTC ATCATTATCG GTTATACCTC TTACGGTATG ATCTACGTAC GCGCACAGGC CGGACCGCCG ATCAACGAGA ACAATCCGTC GACTCCCGAG GCATTCTTTT CCTATCTGAA CCGTGAACAA TACGGCGATA TGCCGCTTTG GCCGCGACGG TGGTCTCCGG AACCCTTGCA TCAGTATTTT TATCAGCAGT ACACAAGCGA TCTCGATTAT TTTGTGGGCT ATCAGCTCAA CCGGATGTAC CTTCGCTATT TCGGTTGGCA GTTTATCGGG CGCGAGCATG ACATGGAAGG AGCAGGAGTC GATTGGTCGG TGCTCTGGGG CCTTCCGTTT CTTGCCGGAT TTGCCGGAGC AGTTGCGCAT TTCAGGCGGC AGTGGAAGAT GGGGCTCGTT GTGACGGCGC TGTTCTTACT GACCGGAGCA GCGCTTGTCA TCTACCTGAA CCAGACTGAA CCGCAGCCGC GCGAGCGCGA TTACAGCTAT GCCGGCAGTT TCTTTGCGTT TGCATTGTGG ATCGGCATCG GCATCGAGGC TCTCTGGTGC TGGTTGAAAG TGCGGACGAA TGCAGCAAAC GGCAAGTCGC AGACCGCATT GGCCGTTGTG CTCATAACAG CTTCGTTACT GCTTGTCAAT GGGCGGATGC TTCAGGCGAA TTTCCGGGTG CACGACCGGT CGGGCAACTT TGTCCCGTGG GACTGGGCAT GGAACATGCT GCAGAGCTGT GAAAAGGATG CCATTCTCTT CACCAATGGA GATAACGATA CCTTTCCGCT CTGGTACCTG CAGGAGGTCG AGCGGATCAG GACCGATGTG CGCGTCGTAA ACCTCAGTCT TGCCAATACA GGCTGGTATC TTCTGCAGTT GAAAAACAGC AGCCCGAGAG GAGCAAAACC TGTCGCGTTC AGTTCTGCCG ACGGCGAGCT GAGTTCGATC ACCTACATTC CCATCGATTC CGTTGATGTC GGGGTCTCTG CAGGGAGCGC AGGATTGATG CTTGAGCGGA AAGCTGCCCG TTATGGTATT TCTCTTCCGT CCAGGCCGGC GGACAGCCTG AAATGGGTAT TGAAGCCGGG TTTTTCCTAT GAGGGTCAGG GATATCTCCG TCCTCAGGAT ATTGCCGTTT ACGAGATCGT CGCCAACAAT TTTCCTGACC GTCCGATCTA TTTCGCACTG ACGGTCGATC AGGAAAGCAT GATCGGTCTC CAGCGCCATC TGAGGCTTGA CGGTCTTGCA TACAGGGTAG TGCCGCTGGA GAGTCCCGAT CCTATGAGTT TTATCGATTC AGCAGAGCTT TACCGTTTGC TGAACGAGGT TTACCGTTTC AGGAATCTCA ACAACCCCGA AGTTGCGCTT GAAGAGACTT CACGGAAATT ATGCGGGAAC TACACACCGC TTTTTGTCCG TCTTGCTCTC GAACTCGCAG TTGAACCCGG CGGAACCATC CGGCTTGACG GTCGCGACGG ATCTCTCCGC AGTGCCGTAA GGGGAGAGCT TGCCGTTGAG GTGCTCGATA GAGCAGCTAA GGTATTGCCA CCCGATCGTT ATCCCATGAA TCCCGAGCTT GCAGCCTCGG TCGTGTCCCT GTACAGCCGT TTGGGATCGA AAAAGAAAGC TGATCAGTAT ATTGATTATC TTGAAAACCT TGCCGCCGGG AGCAGTTATC GTTCCGATCC GAAGCTGTTT TTTGTGCTTG CCGGGGCGTA TCGAGACGCC GGAAGGCCGC GTGAGGCAGA AAAAATCATT GAATCACTTG CCCGGGAGCT GCAGGAGCCC CGTATAAAGG AAGCATTTGA ACAAAAGAAG GAGCCTTAA
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Protein sequence | MTHRALNRLL AVALFAAVEL LYLRTMAPTL SFWDCGEFIA TAYTLGVPHP PGAPLFLLLG RVFSMIPLFS DIGARVNLIS TLASSATVML TYLIALRFII MYRKSDPESW SPGDRVSACG SALVAALALA FSDSFWFNAV ETEVYALSSF FTAMVLWLML RWHEDYPNPG HERWLMLMMY MVGLSIGVHL LSLLAVFAAA MIYYFRKYEV TLKSFAMLVA ASSALFVLIY QVIIKGLPVL FQFASWWGFL LLLFLLAYGV WYTHKERFAM LNTLLVSLFL IIIGYTSYGM IYVRAQAGPP INENNPSTPE AFFSYLNREQ YGDMPLWPRR WSPEPLHQYF YQQYTSDLDY FVGYQLNRMY LRYFGWQFIG REHDMEGAGV DWSVLWGLPF LAGFAGAVAH FRRQWKMGLV VTALFLLTGA ALVIYLNQTE PQPRERDYSY AGSFFAFALW IGIGIEALWC WLKVRTNAAN GKSQTALAVV LITASLLLVN GRMLQANFRV HDRSGNFVPW DWAWNMLQSC EKDAILFTNG DNDTFPLWYL QEVERIRTDV RVVNLSLANT GWYLLQLKNS SPRGAKPVAF SSADGELSSI TYIPIDSVDV GVSAGSAGLM LERKAARYGI SLPSRPADSL KWVLKPGFSY EGQGYLRPQD IAVYEIVANN FPDRPIYFAL TVDQESMIGL QRHLRLDGLA YRVVPLESPD PMSFIDSAEL YRLLNEVYRF RNLNNPEVAL EETSRKLCGN YTPLFVRLAL ELAVEPGGTI RLDGRDGSLR SAVRGELAVE VLDRAAKVLP PDRYPMNPEL AASVVSLYSR LGSKKKADQY IDYLENLAAG SSYRSDPKLF FVLAGAYRDA GRPREAEKII ESLARELQEP RIKEAFEQKK EP
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