Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_2184 |
Symbol | |
ID | 6355978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 2422516 |
End bp | 2423502 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642669775 |
Product | ROK family protein |
Protein accession | YP_001944187 |
Protein GI | 189347658 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | [TIGR00744] ROK family protein (putative glucokinase) |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000268105 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCAAT GGGCAATTGG TATTGATCTC GGTGGTACGG CTGTCAAAGC GGCAATCGTG AGCCGTAAAA AAGGAATTCT CAAAAACAGG ACGGTACCTA CCGATACCGC TTCCGGCCCG GAGGGGATTG TATCGCAGCT TGCCGTTATG ATCGCTTCGC TTTACACCGA AGCCTCTGCA GAGCTTTCCC GTCAAGACTT TTCAGGTATC GGTTTCGGAG CTCCGGGAGC TGTTGATATT GAAGCCGGAA CGCTGAGCTA TCCGCCCAAT CTTCCCGGAT GGACCACCTT TCCCCTGCGC AGCGAGCTTG AGCGCGCCCT GCTGGCCAAA CTGCCGAAGT CTGTACCGGT GGTCATCGAG AACGACGCCA ATGCTGCGGC TTACGGTGAA GCGGTCTATG GCGCCGGCCG TAATTTTCGG GATTTTTTGA TGGTGACACT CGGCACCGGA GTAGGCGGCG GCATCGTTCT GAACCGTAAA CTGTACCGGG GGCCGAACGG AACGGCCGGT GAAATAGGAT TTATGATTGT CGATTTTCAG AGTCCGGCTG TGCATGCCGG TATTCACGGC ACCATAGAAG GGATGATCGG CAAAGAGCGC ATTGTCGAAT ATGCATGCGG CCTTATTCGT GACAACCCTG AAGCCGGCTC GTTGCTTGCG TCTCTCTGTG GCCAGGATTT TTCATCGCTC TCTCCCCGTC ATATCGAGCA GGCGGCAAAA ATGGGCGATC AGCTCTCTCT TGCGGTATGG AACCATGTCG GGGCAATTCT CGGAACGGGG TTCGCTTGCG TTACCTCGCT CATGGATATA CGAAAATTCG TTATCGGGGG GGGGATATCG GCAGCCGGCA CTCTTATTTT CGAACCGGCT TACCGGCAGT TGCTCCGCTC TACCCTGCCT TCGATGCATG ACGGGCTCGA ACTGGTTCCG GCCGAACTCG GCAACAGTGC GGGAATATAT GGCGCGGCGG CGTTGTGTTT CAGTTGA
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Protein sequence | MSQWAIGIDL GGTAVKAAIV SRKKGILKNR TVPTDTASGP EGIVSQLAVM IASLYTEASA ELSRQDFSGI GFGAPGAVDI EAGTLSYPPN LPGWTTFPLR SELERALLAK LPKSVPVVIE NDANAAAYGE AVYGAGRNFR DFLMVTLGTG VGGGIVLNRK LYRGPNGTAG EIGFMIVDFQ SPAVHAGIHG TIEGMIGKER IVEYACGLIR DNPEAGSLLA SLCGQDFSSL SPRHIEQAAK MGDQLSLAVW NHVGAILGTG FACVTSLMDI RKFVIGGGIS AAGTLIFEPA YRQLLRSTLP SMHDGLELVP AELGNSAGIY GAAALCFS
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