Gene Clim_2163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_2163 
Symbol 
ID6355957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2401631 
End bp2402992 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content53% 
IMG OID642669754 
ProductPeptidase M23 
Protein accessionYP_001944166 
Protein GI189347637 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAC CCAAACCGTT CCTGGCAGCT GCAGCCGTCC AGCTTAAACA CTATCTCAGC 
CGCGCAGAAC GCTCGTTCTG GCTCCCCTTT TCCGCAGCCT CTCTTGTCAT GATCTTTTCC
ATATTCACCA TCCTCAGCTC AGCCCCCGGC ACCTATATCG ATGAACTCGG CTTTACCGGC
GACAGTGATT ACGTTGTCAT CGAGGATGCA TCCGAAATAA AAAAACCAGC CATAGACAAA
AAAATCGTAC AACCCGGTGA ATCGCTCTAC ACCATTCTCA TCGCCAACGG CCTCACTCCG
GCAAATGTCG ACGCCATAGC CAGGCAGCTC AAGGGAAGTT TTTCAATCCG CGGGTTCCGC
CCCGGCCAGA ATTATGAAAT AGAAAAAAAC GGCGACGGCC TCTTTCAGCG GTTCACCTAT
TTTCAGGATC GCGCCGTAAC CATACATATC GAACGTGAAA GCGAAAGCGG CGACCTGAAG
ATACGGCGCG ACGCGAAAGA ATATGAAACC CGCGTTGCCA CCATCGAAGG GTCGGTGTCG
AAAACCCTCG CTTCGGAACT CGCCAGGAGA GAACGTTCCG GACTGATGCG CCCGACAAGA
AAGCTGTTTG CCGGACGCCT CGATTTCAAG CGTGACATTA AACCCGGCTC GGAATTCCGC
CTGCTTTTTG AAGAAAAATG GCTTGACGAT GAATGTATCA GCACCGGCAA AATCATTGCA
GCCGAAATTT CTGTAAACAA AAAGAAATAC ACTGCATACC GTTACACCGA CGCGAAAGGC
AAAACCGGGT ATTACGACGA ACAAGGCAAT GCACTCGAAG CACCCGAAAA AACCGCACAG
TTCATTCAGC CCTGCAGTTA TTCCCGAATT TCAAGCGGCT ACGGCTACAG GGTTCATCCT
CTCCGCAGAA CACGCCACTT CCACGGCGGA GTGGATATGG CCGCACGCAC CGGTACTCCG
GTAAAAGCGG TGGCTGAAGG AACCGTCATT TTCAGAGGCA GCAAAGGCGG AGCCGGCAAC
ATGATTACCC TGAAACATCC GGGAGGATAC CACAGCCAGT ACCTGCACCT GAGCCGCTAT
GCCCCGAAAG CGGGAAACGG CAGAAGGGTA AGCCAGGGCG AGATTATCGG CTATGTTGGT
TCGACAGGCA GCTCAACCGG CCCGCACCTT GATTTTCGTA TGATCCATAA CGGAAAGCCG
GTCAATCCGC TTACGGCGCT TTCAGCTTCG AAACCGGAAC CGGGACTTTC AAGGCAGGAA
AAAAACAACC TGCTGGCAGA AATTTCAGTA CTGAAAACGC AGCTTGACAA CAACAGGATG
CTGGCCGCAG GACCTACGAA AAAACAGACG CCGGTGTTGT AG
 
Protein sequence
MKTPKPFLAA AAVQLKHYLS RAERSFWLPF SAASLVMIFS IFTILSSAPG TYIDELGFTG 
DSDYVVIEDA SEIKKPAIDK KIVQPGESLY TILIANGLTP ANVDAIARQL KGSFSIRGFR
PGQNYEIEKN GDGLFQRFTY FQDRAVTIHI ERESESGDLK IRRDAKEYET RVATIEGSVS
KTLASELARR ERSGLMRPTR KLFAGRLDFK RDIKPGSEFR LLFEEKWLDD ECISTGKIIA
AEISVNKKKY TAYRYTDAKG KTGYYDEQGN ALEAPEKTAQ FIQPCSYSRI SSGYGYRVHP
LRRTRHFHGG VDMAARTGTP VKAVAEGTVI FRGSKGGAGN MITLKHPGGY HSQYLHLSRY
APKAGNGRRV SQGEIIGYVG STGSSTGPHL DFRMIHNGKP VNPLTALSAS KPEPGLSRQE
KNNLLAEISV LKTQLDNNRM LAAGPTKKQT PVL