Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_2153 |
Symbol | |
ID | 6355947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 2373062 |
End bp | 2375548 |
Gene Length | 2487 bp |
Protein Length | 828 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642669744 |
Product | TonB-dependent receptor |
Protein accession | YP_001944156 |
Protein GI | 189347627 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.453581 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAA AAAATGCGCA AGCGTACCCC CTTGTCCGTT TTGTGCTTTC AGCATTCTGC CTGCTGGCGC TGCTGGTGCC GCTCCCCTCA TATGGAGCCG ATACCGGATC GGTAAAAGGC AAAATCATCG ACAAAGCTGA CGGGGAGGGC GTTTACGGAG CATCAGTAAC CGTAGCAGGA ACAACCATCG GTACCGCTAC CGACATGAAT GGCAACTTCA CCATCAGCGG TGTACCCGCA AAACAGCAGA AAATTTCCGT CTCCATCGTC GGCTACGCAC CCGCGAGTCA GGTCGTGAGC GTCGGCGCAG GCCAGACCGC AGTTGTAAAC CTCTCGCTCG GCCAGACCAC CATCATGGCC TCGGAAGTGG TTGTCGGCGC CGCGCTCTAC AAACAGGACC GCCTCGACGT GCCCACAACC ACCAACGTGG TGTCGAAGGA AAAAATCAGG GAGGAACCCA ACCCCTCTCT CGACAAAAAC CTTGAAACCG TTCCGGGCGT CAACATCAAT CGTTCGAGCG GTTACAGCGC TTCGACGGTG CAGATCCGCG GATCCAATAC CTTCCAGGGC GGCGGAATCG GCACCCGCGT AGCGGCCTTC TACGACGGTA TTCCGCTCAG CACGCCTGAA ACCGGCGGCA TCGTCTGGAC TAACATCAAC ATGAACTCGG CCGACAAGAT CGAGGTCGTC AAGGGCGCAT CGACCACCCT CTACGGCTCA GGAGCCATGG GCGGCGTCGT GAGCGTGGCC GGCCACCTGC CCGACAAATT TGAGGTGAAG GCTGGCGCGA GCGCGGGCTT CTACGACAAG ACGCCGGCCG AAGACCAAAG CGCATACCGC GACGGTTACA CCCCGTGGCT CTGGAACACC TACGTCGGCA TCGGCAACAA GAGCGGCAAG TGGAACTACA GCCTGCTCTA CTCGCATAGC GAAGACGACG GCTACCGTGA AAACTCGCAG ACCCTGCTGA ACGACGTCAA ACTGAAGGCG CGCTACGACA TCGACGCCAC CCAGTACCTG CAGCTTTCGG CATCCTACAG TGAAACCGAA GCCGGCTATG TCAGCACTTG GCCGTACGAC ATTGTTGGAA GCGGCACATT TGTCGCTAAG CCGCAGTTTG CCTACGACCT CGCCGATTCG GTTTACGCCG ACGACATCGT CAAGAGGAAG GACATCCTTG CCGGCCTGAC CTACTCGAAC ATGCTGAGCG ACAAGCTGAC CCTTGAAGCG AGAATGTACT ACACCTACAA CAAGTACCGG ATAGATTACA ACCCGACCTC TGTTACTCAG CTCTATCCGT ATCTCTATCC GGGATCCATA TACAATGGGT TCATCTATAA CCGCGATCCC GGCGAATTCA ACGAGAACCG TTCGAGCCGT TACGGCGCAG GCGTGAAACT CGACTGGCGT GTGGCCGACA GCCACCGGCT GCTCTTCGGC GTGGACGGCA ACATCGTTGA CGTCGAATCG ACCCAGTACA CCTCAGGCCT GCCTGTAGCG GGAGAGTTCG GATCCATTCA GGAGAAAAAC GCCGCAGTCT TCGTGCAGGA CGAGTGGAAG ATCACCGACC GCCTGACCGC CCTGCTCTCG CTCCGCTACG ACTGGAGCGG CATTGATGCC GATGAGGTGA CATTCAGGGA CTACTCGGTT ACTCCGGGTA ATAATAACGA CGGTCCTATT CTGACCCAGT CCATCGAGAA CCCTTCGGTC GACGCCATCA GCCCGCGTAT CGCCCTCAAC TACAAGGCCA TGGACGACAT GAGCTTCCGC GCCTCGTGGG GCAAGAGCTT CCGCGCGCCG ACGCTCGCCG AGCGGTTCGT GCGTGACGCA GGCCTCTTCA TGGGCAACCC GAACCCGGCG CTCGACAAGG AGACCATGAC CGGATGGGAA GTGGGCGTAT ATAAGCAGTT CGGCGACAAG CTTTCGCTGG ACATCTCCGC CTACCTGAAC GACTACGACA ACCTGATCGA ATCAAGAAAC CTTAATACAG CTACAGGCTT TCCTGTTGTT TTCGAATACC AGAACATCGC GAAAGCGCGC ATCTGGGGCA TCGAAACCAG CCTGAACTAC CGGCCTAACA ACCACTGGAA CTTCAGCCTC GGCTACGCCT ACATGAACGC CAAGGACAAG ACCGGCGACG CCGCATCTCT TGCCGGCAAC GACAACCCCG ATCCCGAGTG GCTGGCCTAT CGTCCCGAGC ACACCGGCTC GGCAAGCGTG AACTGGAAAG CCAACGACGA CCTGACGCTG AACCTGACCG GACGGTACGT CGGCAAGTAC AAGGCCGTGA GCACCTACCC GAACCCCGAG GGTGATAACT ACCCCGGCGA CTTCGTGGTG TTCAACCTCG GCATGAAGTA CCAGCTTACC GAGAACATCA GCACCACCCT GCTCTGCAAG AACATCGGCA ACGTGCAGTA TGAAGAAGCC GAATGGTTCC GCGCTCCGGG CAGAAGCTTC GTACTCGGTG TTGACCTGAC CTACTGA
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Protein sequence | MKTKNAQAYP LVRFVLSAFC LLALLVPLPS YGADTGSVKG KIIDKADGEG VYGASVTVAG TTIGTATDMN GNFTISGVPA KQQKISVSIV GYAPASQVVS VGAGQTAVVN LSLGQTTIMA SEVVVGAALY KQDRLDVPTT TNVVSKEKIR EEPNPSLDKN LETVPGVNIN RSSGYSASTV QIRGSNTFQG GGIGTRVAAF YDGIPLSTPE TGGIVWTNIN MNSADKIEVV KGASTTLYGS GAMGGVVSVA GHLPDKFEVK AGASAGFYDK TPAEDQSAYR DGYTPWLWNT YVGIGNKSGK WNYSLLYSHS EDDGYRENSQ TLLNDVKLKA RYDIDATQYL QLSASYSETE AGYVSTWPYD IVGSGTFVAK PQFAYDLADS VYADDIVKRK DILAGLTYSN MLSDKLTLEA RMYYTYNKYR IDYNPTSVTQ LYPYLYPGSI YNGFIYNRDP GEFNENRSSR YGAGVKLDWR VADSHRLLFG VDGNIVDVES TQYTSGLPVA GEFGSIQEKN AAVFVQDEWK ITDRLTALLS LRYDWSGIDA DEVTFRDYSV TPGNNNDGPI LTQSIENPSV DAISPRIALN YKAMDDMSFR ASWGKSFRAP TLAERFVRDA GLFMGNPNPA LDKETMTGWE VGVYKQFGDK LSLDISAYLN DYDNLIESRN LNTATGFPVV FEYQNIAKAR IWGIETSLNY RPNNHWNFSL GYAYMNAKDK TGDAASLAGN DNPDPEWLAY RPEHTGSASV NWKANDDLTL NLTGRYVGKY KAVSTYPNPE GDNYPGDFVV FNLGMKYQLT ENISTTLLCK NIGNVQYEEA EWFRAPGRSF VLGVDLTY
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