| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_2132 |
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| Symbol | |
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| ID | 6355926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 2350992 |
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| End bp | 2352035 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642669723 |
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| Product | TIM-barrel protein, nifR3 family |
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| Protein accession | YP_001944135 |
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| Protein GI | 189347606 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATAG GTTCAATAGA CATAGATCGT CCCGTTATTC TCGCTCCGAT GGAGGATGTG
ACCGACCGTG CTTTCCGACA GCTCTGCAAG CGCTGCGGTG CGGATATTGT CTATACCGAG
TTCATCAGCG CCGAGGCGTT GCGCCGAGGA GTGGAAAAGA CCATGCGCAA ACTTGCCGTC
GATGAGATCG AACGCCCTGT TGCCGTGCAG ATTTTCGGCA GTACGGTTGA GTCTATGATC
GAGGCTGCGG CTGTTGCCGA AACCTACAAT CCGGATTTTC TCGATATTAA TTTCGGCTGT
CCGACCAAAA AAGTGGCAGG CAAGGGGGCA GGAGCCGCTC TGCTCAGGGA GCCTGAAAAA
ATGCAGGCCA TAGCAGAAGC TGTAGTCAAA AGCGTCGGTA TACCGGTTAC GGCTAAAACC
CGGATCGGCT GGGATCACGA TTCCATCAAT ATTATTGAGG TGCTTCACCG GCTTGAAGAT
GCCGGTATCC GGGCGCTTGC CATCCATGGC CGCACCCGGA GCGACATGTA TAAAGGCAGG
GCAGATCGGG AGCGGATTGC CGAGGCGAAG CGGGAGGCAT CGATACCGGT GATTGCCAAT
GGTGATATCT GGTCGGCGGA GGATGCCCTT GCCATGTTCG ATCAAACCGG TGCCGACGGG
GTCATGATCG GCAGAGGGTC GATCGGTAAT CCATTTATAT TCAGTCAGGC AAAGCACCTG
ATCCGGACAG GAACACCGGC TCCTCCGCCG GGATTTCGGG AGAGGATACA TGCTGCGATA
GAACATCTCA AACTCTCTGT TCAGTATAAA GGCGAGAAAT ACGGTAATCT CGAAATGCGC
AGGCACTATG CCACCTATCT TAAAGGCTTG CCGAAAGTGT CGCAAGTGCG CAATAAACTC
GTTCGGGAAG ATGGGTGGGA GCATATTGTC GAAATTCTTC TCGCCTATGA AGTCGAATGT
GAAGGGTATG CGAAGGAGGG ACGCATCAAA GAGTATGCGG AGTACCTCAA CGACCATTCA
GGAAAACTTG TTTTGAATTA TTAA
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| Protein sequence | MKIGSIDIDR PVILAPMEDV TDRAFRQLCK RCGADIVYTE FISAEALRRG VEKTMRKLAV
DEIERPVAVQ IFGSTVESMI EAAAVAETYN PDFLDINFGC PTKKVAGKGA GAALLREPEK
MQAIAEAVVK SVGIPVTAKT RIGWDHDSIN IIEVLHRLED AGIRALAIHG RTRSDMYKGR
ADRERIAEAK REASIPVIAN GDIWSAEDAL AMFDQTGADG VMIGRGSIGN PFIFSQAKHL
IRTGTPAPPP GFRERIHAAI EHLKLSVQYK GEKYGNLEMR RHYATYLKGL PKVSQVRNKL
VREDGWEHIV EILLAYEVEC EGYAKEGRIK EYAEYLNDHS GKLVLNY
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