Gene Clim_2129 details

Gene Information

• Locus tag: Clim_2129
• ID: 6355923
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: +
• Start bp: 2348424
• End bp: 2348975
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 642669720
• Product: Helix-hairpin-helix DNA-binding class 1
• Protein accession: YP_001944132
• Protein GI: 189347603
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1555] DNA uptake protein and related DNA-binding proteins
• TIGRFAM ID: [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCCCC TTGACAGGCT TGCTGTCAGG CTGAGCCTGA CCAGAGCTGA AATCTCTGTC 
ATCTCCATTC TCGTAATCTT TCTTGTGCTG GGCGAGGCAG TCAGAAATTT CCGGTCGGTA 
CGCGATGCAG ATATTCTTGT AAAACAAAAA GAACGCGAAC AGTTTTCCGA AAGAGAAACC 
GACAGCATGC TCGCCATAGC ATCAGGTTAT GCAAATAACC TTTCTGCGGC AGGAACTCCC 
GGCACTCCCG AAGCATTGAC CAATGCTGAT GAAGCGATCT ATTCCGGAGA TTTTGAAGAA 
GAAAATCCTC CGAAAAAGAA AACGGCACGA CGTTCCGGAA AAAAGGTATT CAGCGGAACC 
ATAGCGTTCA ATAAAGCCTC GGAGAAACAG CTCCAGCAGA TTTCAGGAGT CGGACCGGTT 
ATGGCGAAAC GACTCGTTAC GTTCAGGGCC TCCAAAGGCG GCAGAATAGA ACGGCATGAA 
GAGTTGCTTG AAGTCAAGGG TATTGGAAAA AAGAAACTGG AAATCCTAAA AAAGCATCTT 
ACGCTTGAGT AA 

 

Protein sequence

MNPLDRLAVR LSLTRAEISV ISILVIFLVL GEAVRNFRSV RDADILVKQK EREQFSERET 
DSMLAIASGY ANNLSAAGTP GTPEALTNAD EAIYSGDFEE ENPPKKKTAR RSGKKVFSGT 
IAFNKASEKQ LQQISGVGPV MAKRLVTFRA SKGGRIERHE ELLEVKGIGK KKLEILKKHL 
TLE