| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_2114 |
|---|
| Symbol | |
|---|
| ID | 6355092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 2333888 |
|---|
| End bp | 2334973 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642669705 |
|---|
| Product | MscS Mechanosensitive ion channel |
|---|
| Protein accession | YP_001944117 |
|---|
| Protein GI | 189347588 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0668] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCATAT CCGAATTATT CCGGGATATC ATGCTGGGCA CCTATCTGGT GCCCTTGCTG
ATTATCCTGT TTTCCGTGCT CTTTTATTTC GTTGCGAACT CGGCTTTCAG AAAGGTTATA
GCCCGAATCA GGGTATCGAT AAAGGAGAGC GCAGTTCCTT TTGAACTGCT GGTCTGGCCC
TTCAGGCTCT TTACCGCCCT CATCGGCCTC GGAGCATTTC TGCACTATTT TCCTCTTTCG
ACCGATCTGA AGGATCCGTT TCGTCATATC CTGCTCATTG TTTCCATTAT CGAATTCGCC
TGGCTGCTGA TGCGTCTGAT CATGGTTGTC GAACAGTTCA TGCTGCAGCA CTATTCCACA
ACCGTTCGTG AAAGCGAGGA ATCCCGGAAA ATCACGACGC ATGTCAGTCT TGCCCGGAAA
ATCCTCAACG TACTGATTGT GCTCGTTGCC GTATCGGGTG TGCTGATGAC TTTCGATACC
GTGCGTCAGG TAGGACTGAG CATTCTCGCT TCGGCCGGTA TTGCCGGAGT GATTATAGGT
TTTGCCGCGC AGAAGAGCCT CAGCACCCTT ATTGCCGGAA TCCAGATTGC CATTACCCAG
CCGATAAGGA TCGATGATGT GGTTGTTGTT GAAAAAGAGT GGGGTCGGAT CGAGGAGATT
TCGCTCACCT ATGTCGTTGT GCAGCTCTGG GACCAGCGCC GTATGATTGT GCCGATATCC
TGGTTTATCG ACCGACCTTT CGAGAACTGG ACAAGAACTT CGTCCGAACT GCTCGGGACA
GTTTTCATTT ACACCGATTA TGCCATTCCC CTCGATCAGA TTCGCCGCGA ACTCGAGCGT
ATCGTGGCCG TATCGCCATA TTGGGATGGA CGGGTAGTGA AGATGCATGT TACCAATACA
ACGGACAAAT CTGTCGAGAT TCGGGCGCTC ATCAGTGCGG CTAATTCTTC GGATTTATGG
GAGATTCGAT GCGTTGTGCG TGAACAGCTG ATCGAGTTCA TCAGAAAAAA CTACCCTGGC
GATCTGCCGA AAGTAAGGAT GGAAATGGAT CAACCCGCAT CTGCTGCAGC GGATGAGCCT
GCGTAA
|
|---|
| Protein sequence | MIISELFRDI MLGTYLVPLL IILFSVLFYF VANSAFRKVI ARIRVSIKES AVPFELLVWP
FRLFTALIGL GAFLHYFPLS TDLKDPFRHI LLIVSIIEFA WLLMRLIMVV EQFMLQHYST
TVRESEESRK ITTHVSLARK ILNVLIVLVA VSGVLMTFDT VRQVGLSILA SAGIAGVIIG
FAAQKSLSTL IAGIQIAITQ PIRIDDVVVV EKEWGRIEEI SLTYVVVQLW DQRRMIVPIS
WFIDRPFENW TRTSSELLGT VFIYTDYAIP LDQIRRELER IVAVSPYWDG RVVKMHVTNT
TDKSVEIRAL ISAANSSDLW EIRCVVREQL IEFIRKNYPG DLPKVRMEMD QPASAAADEP
A
|
|---|
| |