Gene Clim_2096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_2096 
Symbol 
ID6355074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2312200 
End bp2312958 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content56% 
IMG OID642669691 
ProductNADH ubiquinone oxidoreductase 20 kDa subunit 
Protein accessionYP_001944103 
Protein GI189347574 
COG category[C] Energy production and conversion 
COG ID[COG1941] Coenzyme F420-reducing hydrogenase, gamma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAATC CCGTTTACAC ATTTGAAAAA CTGAAATTCG CCTCGTTCGA ATTCACCTGC 
TGCGAAGGGT GCCAGCTGCA GCTCACAAAC CGGGAAGCTT CGCTTGCAGA GTTCTTCAGC
CTGCTCGATG TCAGAACGTT CAGGGAGATC TCTTCGGAAA AACATGACGA CTACGATGTG
GCCTTCGTGG AGGGCAGCAT CAGCCGCAGC GACGAAATCG AACGGCTTCT GGCTATCCGC
CGTCAGGCGA AAACGCTGGT CGCATTCGGA ACGTGCGCCT GCTTCGGCGG AGTCAACAGC
CTGAAAAACC GTTACCCTAT AGAAAAGTGC ATTGCGGAGG TGTACGACGG CCAGCCGGTC
GAGAGCCTTC CGGTGCGCAA AATAAGCGAC ATCGTCAAGG TCGATCTCTC CATACCCGGC
TGCCCTGTCG CCAAAAAGGA GGTCGAACGG ATCGTGGTGA GCCTTGTCAC CGGCTCTCTT
GCCACCCTGC CGAAATATCC GGTCTGCGTG GAGTGCAAGG AGCAGTTGAA TACCTGTCTT
TTCGACCTCG GCGAGATCTG CCTCGGCCCG ATCACCAGAG CGGGATGCGA TGCGGTCTGT
ACGACGGGAA AAACTCCCTG TCTCGGCTGC AGGGGTCCTG CCGACGACAT CAACTTTCCG
GCATTCCTCG AACTGGTTGA AAAGCGCGGA CTCAGCCGGA GGGATCTTAA GGAAAAACTC
GGTTTCTATA ACGCATTCGA AGCATACCCG TACCCATGA
 
Protein sequence
MKNPVYTFEK LKFASFEFTC CEGCQLQLTN REASLAEFFS LLDVRTFREI SSEKHDDYDV 
AFVEGSISRS DEIERLLAIR RQAKTLVAFG TCACFGGVNS LKNRYPIEKC IAEVYDGQPV
ESLPVRKISD IVKVDLSIPG CPVAKKEVER IVVSLVTGSL ATLPKYPVCV ECKEQLNTCL
FDLGEICLGP ITRAGCDAVC TTGKTPCLGC RGPADDINFP AFLELVEKRG LSRRDLKEKL
GFYNAFEAYP YP