Gene Clim_2090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_2090 
Symbol 
ID6355068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2306977 
End bp2307768 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content57% 
IMG OID642669686 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_001944098 
Protein GI189347569 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATGATG TACCGCCAGT AAGCAAGGCG AAACTGAAGC TGTACGGCAA ACTGCACCAG 
AAAAAATACC GTGACAGCGA GGGTCTCTTT TTTACCGAAG GGTTTCGCAC GGTAAGCGAA
CTTCTTGAAG CTCTTCCTGA ACCCGGTCTG CTCGATGCAT TGCTGTTCAG GGAGGGAGAG
CAGGCCGCAG AGGGTTTTTA TGGCAGTTAT TCCGGCAGGG TGTTTACGCT TACGGAAAAG
GAGTGTGCCC GGTTGAGCCA GACTGCGACA CCGTCGGGAA TTTTCGGTGT GTTCCGCCAG
CAATCTGCGC TTCCTTTCGA ACCGGAACGG ACAGATGGAA GTTCCCTGAT TGTTGCGCTT
GACGATGTGC AGGATCCCGG AAACGCAGGT ACCATTCTGA GAACCGCGGC ATGGTTCGGC
GCCGATGCCA TGATCTGCAG CGCCGGTACA GCCGACCGGT ACAACGCGAA AGCGGTGCGT
TCTTCCGCAG GGAGCATTTA TGCGTTACCG CATTATGGCG TGGATTCGCT TGAAACGGAA
CTTCTTCGGC TTGCCGGGCG GGGATATGCC GTTATCGCCT CGTCGCTTGC CGGCCAGGAT
TTTCGGGAGT TCACCTCATG GCCTGAAAAG CAGGTGCTCG TGATCGGCAA CGAAGCCAAT
GGCGTGAGTC GGCCGGTTCA GGCGCTTGCC GGGAGGCTTG TGCGAATTCC GCATATCGGT
TCGAAACCTC GCGTCGAATC GCTCAACGCA TCGGTTTCCG CGGCGATACT GATGGAGCGC
CTCGTGCTCT GA
 
Protein sequence
MHDVPPVSKA KLKLYGKLHQ KKYRDSEGLF FTEGFRTVSE LLEALPEPGL LDALLFREGE 
QAAEGFYGSY SGRVFTLTEK ECARLSQTAT PSGIFGVFRQ QSALPFEPER TDGSSLIVAL
DDVQDPGNAG TILRTAAWFG ADAMICSAGT ADRYNAKAVR SSAGSIYALP HYGVDSLETE
LLRLAGRGYA VIASSLAGQD FREFTSWPEK QVLVIGNEAN GVSRPVQALA GRLVRIPHIG
SKPRVESLNA SVSAAILMER LVL