| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_2078 |
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| Symbol | |
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| ID | 6355056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 2290473 |
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| End bp | 2293445 |
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| Gene Length | 2973 bp |
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| Protein Length | 990 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642669674 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001944086 |
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| Protein GI | 189347557 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.553649 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGGAAA AAGAATACAA TGAACTTCTT TCAAGGTTTC TCGAACTTGA AAAAGAGTCG
CAGCGAAGCC GGCAGATAGA GTTCGAACTT CTTGAAAAAC AGGCGGTTCT GCGTGAGCAG
AATATCAAGC TGATCAGGAA ATCGATAGAA CTTTCGGATT ACAAACGGCA ACTCGAGGAT
AAGAACTATG AACTCGAACT CTCTCGCCGG GAGCTTGAAA AAGCGCTTGT TTCACTCAGG
GAGAGTGAAA ATACCCTGAG TACCGTTCTT GTCAACAGCC CCGATACGAT CATTGCGGTG
GATATCCGGC ACAGGATAAT TTATTTCAAC CGCGATTTTC CCCTTTCCCA TCGTTCTCTG
CAGGAAGGTC TGCACTTGTG CGACTGTATC GTGCCATCCA GCCATGACGA GTACCATCGT
GCCATCGAAG CCGTTTTTCG CAGCGGACAC GCGCACTCGC TTGAGAGCCT GATATCGCAG
GGTGACGGAG GCACGGTGGA AGTGGAGTCG AAACTCGGCC CGTGCTTCAT CAACGGAACT
GTCGGTTCCG TGGTCATACT TGTGTCTGAC ATTACCGAAC GGAAACGCAT GGAGCGTGAG
CTGAAGCGAT CGCTCGATGA GCTGGAGCGA TTCAACCGCG TTATGGTAGG CCGCGAAATG
CGCAGCATCG AACTGAAAGC GGAGCTTGAT CGGTTGAGAG GCGGCCTTGC ATCTGACGAT
CTCGCCGGAA TGGACGTAAA TCGAAAACAG GTTTCTTCAT GCTCTTTGAA TTCGATGCCT
GCTGCTGGCT TCTCCGACTG GCTGTGTCCG GCAGAAAACA TTCAGGACGA GCTTTCCGAA
GAACCCGAGG GCGACTGTAT GTTCAAAAGC AGGCAGCGGT CAGCTCTGCT CAACCTTGTC
GAGGATGCAG ACCTTGCGAG GAACCAGTTG ATCGAAACGA ACATGAAGCT CGGGGAGTCC
GTCAGGAAGA CGGAAGAAAT GGCAAAGAGC GCCAGGGAGG CAAATGAGGC GAAAAGCCGG
TTTCTGGCGA ATATGAGTCA TGAGATACGT ACGCCCATGA ACGGAGTCAT CGGTATGTCC
GATATTCTGC TCGATACCAG TCTTGATATC GAACAGCGGA AGTACGTCGA GACAATCATC
AGCAGCGGGA AGAACCTGTT GAAAATCATC AACGATATTC TCGATTTTTC TAAAATCGAG
GCCAACCGAC TTGAACTCGA CCATATCGAT TTCAATCTGA TCGATTTGCT CGAGGATGTC
GGTACGCTTC TTGGCTTTGA GGCGTATGAG AAAGAACTTG AACTGGTTTT TCGAACCGGC
CCGACCCTGC CTTTGCGACT TAAGGGTGAC CCGGCAAGGC TTCGCCAGAT TCTTGTCAAC
CTTGTGAGCA ATGCAATCAA GTTTACGCAT GAGGGTGAAG TTGTCCTCGA TGCTGTGCTC
GAACGTGAGA CTTCAGAGCA GGTGGTTATC GGTTTTACGG TCAGTGATAC GGGTATAGGC
ATCGAAGAGG AGCGGAAAGG TTCGATTTTC GAGCCTTTCG TTCAGGCGGA CGGGACAACG
ATCCGCAAAT ACGGTGGAAC CGGTCTCGGT TTGTCGATTT CCAGTCATCT TGCCGAAAAA
ATGGGAAGCG GCATCACCGT GCAGAGCAGA ATCGGGACAG GTTCTGTTTT CCGTTTTGAC
GCAGCGTTCG AAAAAACAGC GCCGGGCGAA AGTGCTGAAA CCTTTCTGCC CCGGATTCCG
CCGGGACTCG ATGTGCTCGT TTTCAGCGGC AACGGCAGTA TGCGCGTCAT GTTTCAGGAG
CTTTTCGATA GTATGCAATG TTCCTGCAAT TGCCCTGATT CTGTTCATGA AGCCGTTCGA
TTGATTGAAA ACAGGAGGTT CGATGTCATG CTGCTCGATG TGCCTGTGCG CCGCAGCAAC
CCTGATGCAC TGAAAGAGTT GTTTGCTGCG GCTGAAAACT CTTCCCGACT TCGGGTCATA
GTGCTCGTTT CGGCAGGCCA GGCAGATGAT ATCAGGAAAA AGCATCGAGC ATGGATATTC
GCCTTGCTTG TCAAACCGTT ACATCTCGGC GAATTGCTGC AGGTGACTGC CGCTGTTGTG
GCTCAGGGAT CCCGGCCTCC TGACAGTCGG ACTCAGGGCA CCAAAGGTAC AGTGGTTACC
CCTCAGCTGC AGTCGCTCAA CCCTGACTAC CGGATTTTGC TGGTGGAGGA TAGCAGGGTC
AACCAGCAGG TTGCGATTTG CATGCTTCTC AAACTCGGTT ATCATGCGGA TCTCGCCGAA
GATGGATGCG AAGCGCTTCT GATGCTCAGC GAGAAACGTT ATGACCTGGT GCTGATGGAC
TGCCAGATGC CACGCATGGA TGGATATGAA ACCGCTTTCC ATATCCGGAA CAAACCGGAA
CTGGCCGTCA ACAGGGATGT TGTCATAGTT GCCATGACGG CGCATGCGAT ACAGGGAGAC
AAGGAGAGGT GTCTCGCGGC AGGTATGGAC GATTACCTTG CTAAACCCGT GCAGAAATCG
GATCTTGCAT TTATTATCAA CACTTATTTG TTTAAAAACA TGCAGAGTCA AATGCAGAGG
GAGGATGATT TATCCGGTGG TGCAAATATC AGGCCTGCCG GAGATGTTTT CCGGATCGAT
GAGCTTCTGC AGCGTCTTCA GAATGATGAG GAGATCATCA GGATCATCAT ATCCCAGTTT
ATGCTCGATA CTCCACTGCA GATACGGGAT CTTCAGGAAG CTGTAAAGAG AGGGGATCGC
GAAGAGGTCC GTCATATCTC CCATACCATC AAAGGGGCCG CCGCGACGGT AGCTGCCGAA
GAGCTGAGAT CGCTGGCATC GTCGATAGAG CAGGCTGCTA AAACCGGCCC TGTCGAACAG
GCAGCCGCCG AACTTCGGGA ACTGCCGTCC GCGTTCAGCC GTTATGCCTC AGAGACGACG
GCAAGCGGTT GGTACAGGGA GAGCATGGAG TAA
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| Protein sequence | MWEKEYNELL SRFLELEKES QRSRQIEFEL LEKQAVLREQ NIKLIRKSIE LSDYKRQLED
KNYELELSRR ELEKALVSLR ESENTLSTVL VNSPDTIIAV DIRHRIIYFN RDFPLSHRSL
QEGLHLCDCI VPSSHDEYHR AIEAVFRSGH AHSLESLISQ GDGGTVEVES KLGPCFINGT
VGSVVILVSD ITERKRMERE LKRSLDELER FNRVMVGREM RSIELKAELD RLRGGLASDD
LAGMDVNRKQ VSSCSLNSMP AAGFSDWLCP AENIQDELSE EPEGDCMFKS RQRSALLNLV
EDADLARNQL IETNMKLGES VRKTEEMAKS AREANEAKSR FLANMSHEIR TPMNGVIGMS
DILLDTSLDI EQRKYVETII SSGKNLLKII NDILDFSKIE ANRLELDHID FNLIDLLEDV
GTLLGFEAYE KELELVFRTG PTLPLRLKGD PARLRQILVN LVSNAIKFTH EGEVVLDAVL
ERETSEQVVI GFTVSDTGIG IEEERKGSIF EPFVQADGTT IRKYGGTGLG LSISSHLAEK
MGSGITVQSR IGTGSVFRFD AAFEKTAPGE SAETFLPRIP PGLDVLVFSG NGSMRVMFQE
LFDSMQCSCN CPDSVHEAVR LIENRRFDVM LLDVPVRRSN PDALKELFAA AENSSRLRVI
VLVSAGQADD IRKKHRAWIF ALLVKPLHLG ELLQVTAAVV AQGSRPPDSR TQGTKGTVVT
PQLQSLNPDY RILLVEDSRV NQQVAICMLL KLGYHADLAE DGCEALLMLS EKRYDLVLMD
CQMPRMDGYE TAFHIRNKPE LAVNRDVVIV AMTAHAIQGD KERCLAAGMD DYLAKPVQKS
DLAFIINTYL FKNMQSQMQR EDDLSGGANI RPAGDVFRID ELLQRLQNDE EIIRIIISQF
MLDTPLQIRD LQEAVKRGDR EEVRHISHTI KGAAATVAAE ELRSLASSIE QAAKTGPVEQ
AAAELRELPS AFSRYASETT ASGWYRESME
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