Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_2070 |
Symbol | |
ID | 6355048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 2282634 |
End bp | 2283359 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642669666 |
Product | hypothetical protein |
Protein accession | YP_001944078 |
Protein GI | 189347549 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00317264 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTCGTT CTATGGTAAT GTTATTTTTC ATTCTTTCGG TGCTGCCTGC ACCCGTTCAC GCCTTTTCCT TCCAGCAGAA TTCTTTTCGT AAACAGATAT CCACTCTTTT CCACTCTCCC GAACTGAAAA ACAAGGTCGA TCCACAAGTA CTCAATATGG CACTTGCCGG TTATTACTCC CTGAAAGAGC AGGGAAAGGT TAACCGTGAT GGAATTCTGA CCGTGATCGA TTTCAATAAA CCCTCGGTGG ATGATCGTCT TTTTGTGATC GATATCAATC GGGGAAGACT GCTTTATTCC GGTCTCGTCG CTCACGGCAG CGGCAGCGGC GATAATTACG CTTACGATTT CTCGAACGCT CCCGGCTCGC ACAAGAGCAG TCTCGGATTT TACAGGACGG GAATGACCTA TGACGGAAAA CACGGCTATT CGCTCAGGCT TCAGGGCATG GAACCCGGTA TAAACGACAA TGCCGAGTCG AGAAGCATCG TTATTCATGG CGCCGATTAT GTTTCACAGG ATTTTATCAG GAAGCATGGA CGTCTCGGAC GAAGCCAGGG GTGTCCTGCC GTATCATTTG ACAGCTTTCA GCATGTCATC GATCTCATCA AGGATGGAAG TTGTCTTTTT ATCTATCACA GGGATGGCGA GTACTCGTCA GGTTCGCGCC TGATCAATCC GGGCTTTGCT CTTCTGCAGC ATAATCCGGG CATTCTCGCC TCATAA
|
Protein sequence | MIRSMVMLFF ILSVLPAPVH AFSFQQNSFR KQISTLFHSP ELKNKVDPQV LNMALAGYYS LKEQGKVNRD GILTVIDFNK PSVDDRLFVI DINRGRLLYS GLVAHGSGSG DNYAYDFSNA PGSHKSSLGF YRTGMTYDGK HGYSLRLQGM EPGINDNAES RSIVIHGADY VSQDFIRKHG RLGRSQGCPA VSFDSFQHVI DLIKDGSCLF IYHRDGEYSS GSRLINPGFA LLQHNPGILA S
|
| |