| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_2060 |
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| Symbol | mnmA |
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| ID | 6355038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 2270660 |
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| End bp | 2271736 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642669656 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001944068 |
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| Protein GI | 189347539 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAGCT CACAGGCCGT CGTAACCGGC ATATCGGGCG GTGTTGACTC CGCCGTTGCC
GCATGTCTGC TGCACAGGCA GGGGTACCGC GTCACCGGCA TCAACATCAG AATCCTCGAC
ACTCCTGTCG ATAATCCTTC GCTGCAACCA TCCCGGCTGG TGATCAGCGA CCATCCCGAC
TTTCAGATTC CGGTCTTCAG CCTGAACCTG AGCGCAAAAT TCTTCGATGC GGTCATCCGT
TACTTCCGGG ACGACTACCT CTCGGGAAGA ACGCCAAATC CCTGCATGGT CTGCAATAAA
ACCATCAAAT GGTATGGGCT TCTCGAAGCG GCCCGCATGC TCGAAGCGGA GATGATCGCG
ACGGGACACT ACGCGCGAAC GTCGTTCAGC GATGGCCGGT ACCGTCTCAT GAAGGGATGC
GACCCCGAGA AAGACCAGAG TTATTTTCTC TGGATGCTCT CGCAGGCCGA TCTCTCGAAA
ACCCTGCTGC CGCTTGGCGC TCTGACAAAA CCCGAAGTGC GCGAACTCGC CCGGACCTTT
GGTGTGAGAG CGGCAGAAAA AAAAGAGAGC CAGGAAATCT GCTTCGTGCC GAACGACGAT
TACTGCAGTT ATCTGAAAAA CTCGATACCC GGTCTTGAAC AGGAAGTTGC CGGGGGGGAA
ATCGTGGATG CCGACGGTAA CGTGCTGGGG CATCACCGGG GATATCCCTT CTACACCATC
GGCCAGCGTC GCGGCCTCGG CATCCCGGCG CCGAAACCGC TCTATGTAAC CGGATTGGAT
GCACGCCACA ACCGCATCCG GGTAGGCGGC AAGGCAGATC TGGAGTGCCG CGCCCTTACG
GCTTCGGGCC TCAACTGGAT AGGCATCGAA GCGCCCTCTT CTCCGTTCGA AACCGCTGCG
CGTATTCGCT ACCGCGACAA AGAAAGCCCA TGCACGGTCG AGCCGATCGG CGGCAATAAA
GCGACCGTAA CGTTCGAAAC CCCTAAACAC GGAGTCACTC CGGGTCAAGC CGTGGTATTC
TACCGAAGTG ACGAAGTGCT CGGCGGAGGA TTCATCGACC AGACCCATCA ACCCTGA
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| Protein sequence | MKSSQAVVTG ISGGVDSAVA ACLLHRQGYR VTGINIRILD TPVDNPSLQP SRLVISDHPD
FQIPVFSLNL SAKFFDAVIR YFRDDYLSGR TPNPCMVCNK TIKWYGLLEA ARMLEAEMIA
TGHYARTSFS DGRYRLMKGC DPEKDQSYFL WMLSQADLSK TLLPLGALTK PEVRELARTF
GVRAAEKKES QEICFVPNDD YCSYLKNSIP GLEQEVAGGE IVDADGNVLG HHRGYPFYTI
GQRRGLGIPA PKPLYVTGLD ARHNRIRVGG KADLECRALT ASGLNWIGIE APSSPFETAA
RIRYRDKESP CTVEPIGGNK ATVTFETPKH GVTPGQAVVF YRSDEVLGGG FIDQTHQP
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