Gene Clim_2057 details

Gene Information

• Locus tag: Clim_2057
• ID: 6355035
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: +
• Start bp: 2266673
• End bp: 2267278
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 642669653
• Product: DNA-3-methyladenine glycosylase
• Protein accession: YP_001944065
• Protein GI: 189347536
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2094] 3-methyladenine DNA glycosylase
• TIGRFAM ID: [TIGR00567] DNA-3-methyladenine glycosylase (3mg)

Plasmid Coverage information

• Num covering plasmid clones: 48
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGGGAT TCGTGCAACC GCTTGAAAAA CAATTCTTTG AATGCCCGAC TCTGCCCCTT 
GCCGAAAAGC TGCTGGGCAA AATCCTTGTC CGCCGGATGT CGGATGATCT TGTGCTGAAA 
GGCAGAATCG TCGAGACCGA GGCCTATCTG GGTTATGGAG ACGAAGCCTG CCACGCCTGG 
CGAGGAAGAA CGGAACGGAA CGGGATGATG TTCGCCGAAC CCGGCAGGCT CTACGTGTAT 
TTCACCTACG GCAACCACAA CATGCTCAAC ATCGTCAGCG AACCCGAACA CACCGCCGGA 
GCAGTGCTGA TACGGGCCCT GGAACCGCTT GAAGGAGAAT CGTTCATGCG GGAACGACGC 
GGCACCTCCC TTGCCACAAA CCTCATGAGC GGCCCGGGCA AACTCACCCG GGCGATGGCC 
ATCGACCTCG ACTGCAACGG CCGATCGCTT TTCGACGGAG AATTCTCTGT CGAAGATGCC 
CCGGAACTGC CGGAAGAGGC GATCGGCACC AGCGCGAGAG TGGGCATAAC CCGCAGCCGC 
GACCTGCCCT GGAGAAAGTT CATCATCGGC AACCCGCACC TCTCCAGAGG ACGGGTATCG 
GGATAA 

 

Protein sequence

MKGFVQPLEK QFFECPTLPL AEKLLGKILV RRMSDDLVLK GRIVETEAYL GYGDEACHAW 
RGRTERNGMM FAEPGRLYVY FTYGNHNMLN IVSEPEHTAG AVLIRALEPL EGESFMRERR 
GTSLATNLMS GPGKLTRAMA IDLDCNGRSL FDGEFSVEDA PELPEEAIGT SARVGITRSR 
DLPWRKFIIG NPHLSRGRVS G