Gene Clim_2015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_2015 
Symbol 
ID6355519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2233282 
End bp2233899 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content52% 
IMG OID642669613 
Producthypothetical protein 
Protein accessionYP_001944026 
Protein GI189347497 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCTTC ACTACAAAGT GGCTGTTTTC GGATCTGCGC GGATTCAGGA GGGGGATCGG 
GACTATCAGG ATGTGTTTCT GATAGCAAAA GGCCTTGCGG AAGCCGGTTT CGACATTGTG
ACCGGCGGCG GTCCCGGTCT CATGCAGGCC GCCAATTCCG GTTCGAAAGC CGCACGGTCG
GAAACCCATT CTATCGGTCT GAACATAAAG CTGCCGAGGG AGCAGGGGCC GAACGCCTTT
CTCGACATCA AGCAGGAATT TTCGATTTTC AGCAACCGCC TCGATACCTT TATGGCGCTT
TCTGATGCGG TTGTCGTCGC TCCGGGAGGA ATCGGCACCC TTCTTGAACT GTTCTACGCC
TGGCAGCTTG TACAGGTCGA GCATATCTGC GATACCCCGA TAATCCTTTA CGGCGAAATA
TGGACAAATC TGTTGCTCTG GCTGGAAACC GAGGTGCTGG CGAGGGGGCT TTTCAACAGG
CACGATATGC ACATGATTTT TCATGTGACC GATCCCGATC AGTTGGTGGA ACTGGTCAAA
AAAGTCAATG CGGACCAGCT CAATGAGAAG CACGCCTGTA AAAATTTTTC TAAATACAGA
TCAGAGTTGC ACTCATAG
 
Protein sequence
MDLHYKVAVF GSARIQEGDR DYQDVFLIAK GLAEAGFDIV TGGGPGLMQA ANSGSKAARS 
ETHSIGLNIK LPREQGPNAF LDIKQEFSIF SNRLDTFMAL SDAVVVAPGG IGTLLELFYA
WQLVQVEHIC DTPIILYGEI WTNLLLWLET EVLARGLFNR HDMHMIFHVT DPDQLVELVK
KVNADQLNEK HACKNFSKYR SELHS