Gene Clim_2013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_2013 
Symbol 
ID6355517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2232122 
End bp2232847 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content53% 
IMG OID642669611 
Productubiquinone/menaquinone biosynthesis methyltransferase 
Protein accessionYP_001944024 
Protein GI189347495 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID[TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAAC CAATAGAAAC TGCAAAATCG CTGAACAGGA CAAAATCGCG GTCTTCGATC 
CGCACCATGT TCGACGAGGT TGCCCCGACA TACGACTTTC TCAACCACCT GCTCAGCCTT
GGAATCGACA ACTACTGGAG AGCGGCGGCA ACCGGCCGGG CAAAAAAATT GCTCGGCGGC
AACCCTGCGC CGCGGATTCT CGACGTCGCA ACCGGAACCG GAGATCTGGC GGCATCGATG
GCAAAAATCC CGGGTGCTGA AGTCACCGCT CTTGATCTTT CGCCGGAAAT GCTGGTCATC
GCCCGAAAGA AATATCCCGA CATAACGTTT TACGAAGGGT ATGCCGAAAA ACTCCCGTTC
GATACGGCAA GCTTCGATGT AGTCAGCGCA GGTTTCGGAG TGAGAAATTT CGAAAACCTC
GAACAGGGCA TGCGTGAGTT CCACAGGGTG CTCAAACCCG GCGGTCATGC GTTCATCATC
GAACCGATGA TTCCCCGTGC CGCTTTCGTA AAAAAGCTGT ACCTGATTTA CTTCAAGAAG
GTGCTTCCGA AAATTGCAGC GCTGTTCAGC AAGTCAACCT TCGCCTACGA CTATCTGCCC
CACTCGGTCG AACAGTTTCC GCAGACAGAA GCGTTCACAG CTGTCCTGAA GAAAAACGGT
TTTCGAAGCG CAGAGTACTA CCCCATGACG TTCGAGACCT CGATCCTCTA CGTAGCCACG
AAATAA
 
Protein sequence
MSQPIETAKS LNRTKSRSSI RTMFDEVAPT YDFLNHLLSL GIDNYWRAAA TGRAKKLLGG 
NPAPRILDVA TGTGDLAASM AKIPGAEVTA LDLSPEMLVI ARKKYPDITF YEGYAEKLPF
DTASFDVVSA GFGVRNFENL EQGMREFHRV LKPGGHAFII EPMIPRAAFV KKLYLIYFKK
VLPKIAALFS KSTFAYDYLP HSVEQFPQTE AFTAVLKKNG FRSAEYYPMT FETSILYVAT
K