Gene Clim_2008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_2008 
Symbol 
ID6355512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2227422 
End bp2228336 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content49% 
IMG OID642669606 
Productprotein of unknown function DUF88 
Protein accessionYP_001944019 
Protein GI189347490 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0888225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTAGCG CACTTTTGTT GTTGCTTTTT TTGTGCGATA ATGTACAGGA GAACGTTGAT 
ACAACAGGGA TTCGAAGAAT AATGAGTATG CAGAAAGCCG CACTTTTCAT TGACGGAGCC
AATTTGTTTT ATACGCAGCG CCATCTTGGG TGGCAGATTG ATTTTTCCCG TCTTATGCTC
TATTTTACGA ACCGTTATAC GGTGGTTTCG GCGCGTTATT ACGTCCCTTC ACCTGATCCG
CCCTCTGAAG ATCAGGTGGC TTTCAACAGG GTACTCATAA CGCACGGCTT CGAGATCATA
TCGAAACCGG TAAAAAAGAT CGTCAACAGG GATACCGGCG AGATAATCAT GAAAGGAAAT
CTCGATATCG AGCTTGCCGT AGATGCCATG CTGACCGAAC ATCAGTTCGA GGTGTTTGTC
CTGTTCAGCG GCGACAGCGA TTTTCTGCCT CTGATCATGG CGATGCAGAT GAAAGGAAAA
ACGGTTTCCG TTTTCTCGAC AAGGGGAATA AGCGCCCGCG AGCTGTACAG CGGATCCGAT
ATGGATTTTC ATGATATCTC CCTGATGGCT GTGGAAATGA GCCAGTCGCA ATCGGGAGGC
AGCGGTACCG ACCTGGATTA CCTCAACGCA AGGCTTCCCG AACCAGGCGA GCGGTTTACC
GGTTCCGTGC TGTCCGTAAA GGCCTATGGG ATATTTCTTG TCAACCCGTA TCATGTAAAA
TGTCTGCTTC CGCTGAGCTT TCTCGGGGTG ACTGAACGGA TTGCCGATCT TGCTTCCATT
GTCAGAATGG GTGATCTTTT TGACGTCGCG GTTTTTGCTG TCGACACCTC CCATGATGTG
CCCCAGATAA CCGTCAAGCT CTCGGATCGT CACATGTCGG AAGAGCTCGA GAGAAGAGTA
AGGGCTCTCT CCTGA
 
Protein sequence
MVSALLLLLF LCDNVQENVD TTGIRRIMSM QKAALFIDGA NLFYTQRHLG WQIDFSRLML 
YFTNRYTVVS ARYYVPSPDP PSEDQVAFNR VLITHGFEII SKPVKKIVNR DTGEIIMKGN
LDIELAVDAM LTEHQFEVFV LFSGDSDFLP LIMAMQMKGK TVSVFSTRGI SARELYSGSD
MDFHDISLMA VEMSQSQSGG SGTDLDYLNA RLPEPGERFT GSVLSVKAYG IFLVNPYHVK
CLLPLSFLGV TERIADLASI VRMGDLFDVA VFAVDTSHDV PQITVKLSDR HMSEELERRV
RALS