| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_2002 |
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| Symbol | |
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| ID | 6355506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 2221919 |
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| End bp | 2223361 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642669600 |
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| Product | putative oxidoreductase |
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| Protein accession | YP_001944013 |
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| Protein GI | 189347484 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01316] glutamate synthase (NADPH), homotetrameric
[TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.14117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACTTAA AACCTATGAC GACCAAGGAG CGCCTTGCCA TACCGCGCCA GACCATGCCT
GCACAGGATC CTGCCGAGCG GGTTCGGAAC TTCAATGAGG TCAACCTCGG CTATACACCC
GAGATAGCAC AGAAAGAGGC CATGCGCTGC ATTCAGTGCA AGGACCCCAT ATGCATCAAG
GGCTGTCCCG TAAATATCAA AATAGACAAG TTCATCAAAC TGATCGCGGA GGGAAATTTT
CTCGGAGCCG CAAAAAAAAT CAAGGAGGAC AACATTCTTC CGGCAATCTG CGGCAGGGTG
TGCCCCCAGG AAGATCAGTG CGAAAAAGTA TGCGTTCTGA CCAAAAAGTA TACCCCGGTG
GCTATCGGAA ACCTTGAACG GTTTGCCGCC GATTACGAAC GTGAACATGG ACAGATCGAG
CTGCCTGAAG TGCAGGCGTC GACAGGGAAA AAAATAGCCG TTATCGGCAG CGGGCCGGCC
GGCCTGAGCT GTGCGAACGA TCTGGCCCGT TTCGGCCACT CCGTTACGGT TTTCGAGGCA
CTGCATGAAC TCGGAGGCGT TCTGATGTAT GGAATTCCGG AATTCCGGCT TCCGAAGGAT
ATTGTAAAGA TCGAAATCGA GGGACTGAAA AAGATCGGGG TAGAGTTTGT CGCCAATACC
GTTGTCGGAC GATCGGTTAC CATCGATGAA CTGATGAATG ATGAGCATTT CGATGCCGTC
TTTATCGGAG TTGGAGCCGG TCTGCCGTGG TTTATGGGCA TTCCCGGCGA AAACCTTCTC
GGGGTTTATG CCGCCAACGA GTTTCTCACG AGGGTAAACC TGATGCAGTC CTATACCTTC
CCTGAGAACG ACACCCCGGT TTTCGATTGC AAAGGGAAAA ATATCGCCGT CTTCGGTGGC
GGCAATACCG CTATGGATGC CGTTCGTACC GCGAAAAGAC TTGGAGCGGA ACATGCCTAT
ATCGTCTATC GTCGTTCTGA AGCCGAAATG CCGGCCCGCG CCGAAGAGAT TCATAATGCG
AAAGAGGAAG GCATCGAATT TCTGCTGCTG ATGAACCCGG TCGAATTTAT CGGTAACGAG
CAGCAGTGGC TGACCGGAGT GAAGTGCCTC CGGATGGAGC TGGGAGAGCC GGACGATTCC
GGTCGCCGTA AACCGGTACC GGTACAAGGT TCGGAATTCG TGCTGCCTGT CGATATGGCG
GTAATCTCCA TAGGAAACGG CTCGAATCCG CTCATCAAGC AGACAACTCC CGAAATCGAA
GTCAGCAGAA GGGACACCAT CGTCGTCGAT ATCAACACCA TGGCAACCTC CAAAGAGAAC
GTGTATGCCG GAGGCGATAT CGTCACAGGC GGCGCTACCG TCATTCTGGC CATGGGGGCG
GGACGTACGG CTGCGAAAGC CATTCATGAA CAGCTCTCGG AGCAGGCATC GAATCCCCTA
TGA
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| Protein sequence | MDLKPMTTKE RLAIPRQTMP AQDPAERVRN FNEVNLGYTP EIAQKEAMRC IQCKDPICIK
GCPVNIKIDK FIKLIAEGNF LGAAKKIKED NILPAICGRV CPQEDQCEKV CVLTKKYTPV
AIGNLERFAA DYEREHGQIE LPEVQASTGK KIAVIGSGPA GLSCANDLAR FGHSVTVFEA
LHELGGVLMY GIPEFRLPKD IVKIEIEGLK KIGVEFVANT VVGRSVTIDE LMNDEHFDAV
FIGVGAGLPW FMGIPGENLL GVYAANEFLT RVNLMQSYTF PENDTPVFDC KGKNIAVFGG
GNTAMDAVRT AKRLGAEHAY IVYRRSEAEM PARAEEIHNA KEEGIEFLLL MNPVEFIGNE
QQWLTGVKCL RMELGEPDDS GRRKPVPVQG SEFVLPVDMA VISIGNGSNP LIKQTTPEIE
VSRRDTIVVD INTMATSKEN VYAGGDIVTG GATVILAMGA GRTAAKAIHE QLSEQASNPL
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