Gene Clim_2000 details

Gene Information

• Locus tag: Clim_2000
• Symbol: hisH
• ID: 6355504
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: -
• Start bp: 2220185
• End bp: 2220790
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 642669598
• Product: imidazole glycerol phosphate synthase subunit HisH
• Protein accession: YP_001944011
• Protein GI: 189347482
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0118] Glutamine amidotransferase
• TIGRFAM ID: [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTTTTA TTGCCGATTA CGGGGCGGGA AACCTCCACT CAGTCAAGAA AGCTTTCGAT 
TACCTGGGCA TCAAAGCCAT GGTCAGCAGC GATCCGGGGA AACTGTCGGG ACACAGCAAA 
GTGCTTCTGC CCGGCGTAGG AGCTTTCGGT CAGGCCATTG ACTCACTCAA CGCTTCCGGA 
TTTACCGAAG CCGTTCTCGA ACATCTCGAC AAAGGGGGGC AACTGCTTGG CATATGCCTC 
GGCATGCAGT TGCTTCTGGG CGAAAGTGAA GAAATGGGCG TTCATCAGGG GATCGATCTG 
GTTCCGGGAA AGGTTCTTCG ATTCAGAAGC GAAACCGATA AAATTCCCCA GATCGGCTGG 
AATTCCGTCG ATCTGAAGAA AGAGTGCGTC TTGTTCAAAG GAATCGAAGA TCACTCCTTT 
TTTTATTTTG TGCACTCTTA TTACTGCGAA CCGGCGAATC CAGGGGATAT AGCGGCAACG 
ACCTGGTTCG CCGGAAAAAA TTTCTGTTCG GCCATTGAAA AAAATGGTAT TTTCGCTGTA 
CAGTTTCATC CGGAAAAAAG CTCTGAAGCC GGACTTCAGG TTCTGAAAAA TTTTGCCGGA 
TGTTAA 

 

Protein sequence

MIFIADYGAG NLHSVKKAFD YLGIKAMVSS DPGKLSGHSK VLLPGVGAFG QAIDSLNASG 
FTEAVLEHLD KGGQLLGICL GMQLLLGESE EMGVHQGIDL VPGKVLRFRS ETDKIPQIGW 
NSVDLKKECV LFKGIEDHSF FYFVHSYYCE PANPGDIAAT TWFAGKNFCS AIEKNGIFAV 
QFHPEKSSEA GLQVLKNFAG C