| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1994 |
|---|
| Symbol | |
|---|
| ID | 6355498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | + |
|---|
| Start bp | 2214040 |
|---|
| End bp | 2214849 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642669592 |
|---|
| Product | phosphatidate cytidylyltransferase |
|---|
| Protein accession | YP_001944005 |
|---|
| Protein GI | 189347476 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0170] Dolichol kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACACT CCGTTTCATG TCGCTTGAGG TTTCCGCCGG ATAATGATTG TTTCCTCATC
CGTCGTTTTC GGTGTATATT GGCCCGGAAA ACCGATCATA ACAAGATTGA ACGGCACGTG
ACCGAAACAC CTGGCAGCAG AACCGACAAC CGAAACAACA GACCCGACCG ACTCGGCATC
CGGCATGAAC TCGCCCGCAA GGCAATTCAT CTTTCATCGA TCACCATCCC CCTGATCTAC
TGCCATATCA CCCGTGATCT CGCGCTCATA CTCCTCGTTC CGCTTTTCAT GGGGTTCCTG
CTGGTGGATC TTCTGAAAAA TGTTTCAGAA CCGGTATCGA CATGGTATCG CCGTAATTTC
GGAGCCATGC TCAGGGAGCA TGAACTATCG GAGAAAAGCC GCCATCTTAA CGGGGCAACC
TGCATAACCC TTTCAGCCCT GCTGCTGGTT GTGTTCTTTC CGAAAATTCT TGCCATCACG
GCTTTTTCTA TGGTTGCCGT TTCAGATACC GTTGCCGCAC TTGCAGGAAA AACTTTCGGC
AGGCACCGTT TCGGACATAA AAGTCTTGAA GGAAGTGCGG CTTTCTTTAT TTCCGCGCTG
CTTATTGTAT CGATCATACC CGGCCTCAAT CTGCCGATCG GGATACTCAT GGCCGTAACG
GCAACGCTGA CGGAAGCGTT CGACTTCCGT ATCGGAGCAT TCAGGATTGA CGACAATATC
TCCATTCCCC TTATCAGTGC AGGCACCGGC CTGATCTGCT ACAGCATCTT CCTTCCGGAG
CAGATCGCCT CACTCTCTTT CTGCCGGTAA
|
|---|
| Protein sequence | MEHSVSCRLR FPPDNDCFLI RRFRCILARK TDHNKIERHV TETPGSRTDN RNNRPDRLGI
RHELARKAIH LSSITIPLIY CHITRDLALI LLVPLFMGFL LVDLLKNVSE PVSTWYRRNF
GAMLREHELS EKSRHLNGAT CITLSALLLV VFFPKILAIT AFSMVAVSDT VAALAGKTFG
RHRFGHKSLE GSAAFFISAL LIVSIIPGLN LPIGILMAVT ATLTEAFDFR IGAFRIDDNI
SIPLISAGTG LICYSIFLPE QIASLSFCR
|
|---|
| |